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The map label for this gene is fdhD [H]

Identifier: 222523489

GI number: 222523489

Start: 231235

End: 232092

Strand: Reverse

Name: fdhD [H]

Synonym: Chy400_0195

Alternate gene names: 222523489

Gene position: 232092-231235 (Counterclockwise)

Preceding gene: 222523490

Following gene: 222523485

Centisome position: 4.4

GC content: 58.51

Gene sequence:

>858_bases
ATGATAACGCGAGCAAGCACCCGGCGCCGCACGATACTGAAGGTACGCGATGGGCGCTGGCAACAGACAAAAGACACCGT
CGTTGTTGAAGAACCGCTGGAGATTCGCCTGGCTACAGCGGGCAATCCGCAAAGTACTGCGCTGGCGACCGTGATGCGCA
CGCCAGGCGCCGATGTTGAACTGGCCGCCGGATTTTTGTTCGGCGAAGGGATTGTACGAGATCGCTACGACATCGTGACC
ATTCGCTACTGCGTTGACGCCGATCTCGATGAAGAGGCGCGGTTCAACACTCTGATCGTTACCCTGCGGCCAGAGCTTGA
CCTCAACCTCGACCATATCCGCCGACTCTTCTTCGTCTCGTCATCGTGTGGGGTGTGCGGAAAGATTTCGCTGGAAGCCC
TGCGGTTACGCGGATGCACACCGCTTATCGATGACCCGACCCTGCAAGTACGTTGCTCGGTGCTGGCCGGAATCGATCAA
CGGGTGCAACAGGCACAGGAACTCTTTAGTCGGACCGGTGGCTTACACGCTGCCGCCCTCATCTCGCTTGACGGTCAGAT
CCACGCTCTTCACGAAGATATTGGTCGGCACAATGCCGTTGACAAATTGATCGGCGATCACCTGCTCGGTGGTCGACTGG
AACTGCTGCGGCAATCAGTTTTGCTGGTGAGTGGTCGGGCCAGCTTCGAGATCATGCAAAAGGCACTGATGGCCCAGATT
CCGATTGTCGCCGCCGTCGGTGCACCCTCGACCCTGGCGGTTACCCTGGCCCAGCATTTTAATATGACCCTGATCGGCTT
TCTGCGGGGAAGCTCGTTCAACATTTACGCCGGCGCCGGACGGGTGGAGGAGGGGTAG

Upstream 100 bases:

>100_bases
CGATCCAGGGGCGGGTGTGCCGTCATACAAGGCGCTGGTCAGCATCCATCCGATCACTGAGGCGGTGCTTCAGGAGCAGC
GCTAACGCGGGGCATACGGC

Downstream 100 bases:

>100_bases
AAACAGCTTTTGCCCGCGCAGACAACACCAGGCTTCCTCGTGTGTAGCGGGCAACACCCCCGTCTGCCAGGTGTTGCCCG
TTGAAAACATCAGCTACGCA

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MITRASTRRRTILKVRDGRWQQTKDTVVVEEPLEIRLATAGNPQSTALATVMRTPGADVELAAGFLFGEGIVRDRYDIVT
IRYCVDADLDEEARFNTLIVTLRPELDLNLDHIRRLFFVSSSCGVCGKISLEALRLRGCTPLIDDPTLQVRCSVLAGIDQ
RVQQAQELFSRTGGLHAAALISLDGQIHALHEDIGRHNAVDKLIGDHLLGGRLELLRQSVLLVSGRASFEIMQKALMAQI
PIVAAVGAPSTLAVTLAQHFNMTLIGFLRGSSFNIYAGAGRVEEG

Sequences:

>Translated_285_residues
MITRASTRRRTILKVRDGRWQQTKDTVVVEEPLEIRLATAGNPQSTALATVMRTPGADVELAAGFLFGEGIVRDRYDIVT
IRYCVDADLDEEARFNTLIVTLRPELDLNLDHIRRLFFVSSSCGVCGKISLEALRLRGCTPLIDDPTLQVRCSVLAGIDQ
RVQQAQELFSRTGGLHAAALISLDGQIHALHEDIGRHNAVDKLIGDHLLGGRLELLRQSVLLVSGRASFEIMQKALMAQI
PIVAAVGAPSTLAVTLAQHFNMTLIGFLRGSSFNIYAGAGRVEEG
>Mature_285_residues
MITRASTRRRTILKVRDGRWQQTKDTVVVEEPLEIRLATAGNPQSTALATVMRTPGADVELAAGFLFGEGIVRDRYDIVT
IRYCVDADLDEEARFNTLIVTLRPELDLNLDHIRRLFFVSSSCGVCGKISLEALRLRGCTPLIDDPTLQVRCSVLAGIDQ
RVQQAQELFSRTGGLHAAALISLDGQIHALHEDIGRHNAVDKLIGDHLLGGRLELLRQSVLLVSGRASFEIMQKALMAQI
PIVAAVGAPSTLAVTLAQHFNMTLIGFLRGSSFNIYAGAGRVEEG

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=233, Percent_Identity=32.1888412017167, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31136; Mature: 31136

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITRASTRRRTILKVRDGRWQQTKDTVVVEEPLEIRLATAGNPQSTALATVMRTPGADVE
CCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCEE
LAAGFLFGEGIVRDRYDIVTIRYCVDADLDEEARFNTLIVTLRPELDLNLDHIRRLFFVS
EEEHEEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCC
SSCGVCGKISLEALRLRGCTPLIDDPTLQVRCSVLAGIDQRVQQAQELFSRTGGLHAAAL
CCCCCCCCCCHHHHEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
ISLDGQIHALHEDIGRHNAVDKLIGDHLLGGRLELLRQSVLLVSGRASFEIMQKALMAQI
EEECCCEEHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHC
PIVAAVGAPSTLAVTLAQHFNMTLIGFLRGSSFNIYAGAGRVEEG
CEEEECCCCHHHHHHHHHHCCEEEEEEEECCCEEEEECCCCCCCC
>Mature Secondary Structure
MITRASTRRRTILKVRDGRWQQTKDTVVVEEPLEIRLATAGNPQSTALATVMRTPGADVE
CCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCEE
LAAGFLFGEGIVRDRYDIVTIRYCVDADLDEEARFNTLIVTLRPELDLNLDHIRRLFFVS
EEEHEEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCC
SSCGVCGKISLEALRLRGCTPLIDDPTLQVRCSVLAGIDQRVQQAQELFSRTGGLHAAAL
CCCCCCCCCCHHHHEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
ISLDGQIHALHEDIGRHNAVDKLIGDHLLGGRLELLRQSVLLVSGRASFEIMQKALMAQI
EEECCCEEHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHC
PIVAAVGAPSTLAVTLAQHFNMTLIGFLRGSSFNIYAGAGRVEEG
CEEEECCCCHHHHHHHHHHCCEEEEEEEECCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]