| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523439
Identifier: 222523439
GI number: 222523439
Start: 172127
End: 172840
Strand: Direct
Name: 222523439
Synonym: Chy400_0142
Alternate gene names: NA
Gene position: 172127-172840 (Clockwise)
Preceding gene: 222523438
Following gene: 222523440
Centisome position: 3.27
GC content: 57.84
Gene sequence:
>714_bases ATGGTTCGTCCATTGGTCATCATCGGTGGGTATCTGACCAGTCCCAACGACTTTAGCGCCCTGGCCCAGGCGCTATCGCA GCCCCCATTTGATTTTCGGGTCTTCGTGACCCCCATCGGACGCCTGCGCTGGGCCTTGACCCGCGACTGGGATTTTCGCC CGGTATTGCGGATTGTCCGCGAGACGGTCGCGCAGGCTCTGCACGAAACGGGTGCCGAGACCGTCACGATTCTGGCGCAC AGTGTAGGTGGAACCGTCGCCCGCATGTATCTTGGCGATCAGCCCTACAAAGGCGAGATTTATGGCGGACACCGCTTCGT CGATCACCTCATCATGCTCGGTACACCGCACCACAGTCAGGAATTCTGGACCCGGCAGACTGTCGGCTTCACCAATCGCA GTTATCCAGGCGCATATTACCGCCACATTCGCTACACCTCGATCATTGGGCGAAGCATTCAGGCCAATCGCAAAGGACGC TGGATTGAACGGATGGCCTACAACAGTTATGTCATGATCGATGGTCCTGCCGGCGCTCAAGCGTGGGGAGATGGAATTAC AACGCTCCGTTGTGCAGCGTTGGCTGGAGCTGAATATCTGGTCGTGCCCGGCCTTCATCACTCACCCATCCACGGACGTC CCTGGTACGGCGACCCGGATGGGTTGCGAGAGTGGCAACGCGTGTTAATGAGATCATCACCACTTGTTGTTTGA
Upstream 100 bases:
>100_bases TCCTGGAAGGTGCCCGTCACGCACCGTACAACGCACCGGCAACCTGGTACGGGGCACGTGACGTGGTACCACTCTGGTTT GATGCCGGGTGAGGGTAGGT
Downstream 100 bases:
>100_bases AATGTCGCCGATTTGTACTATAATACAAATTACATGAACTCAACGCACTTTGACCGAATTATTCTGTACGTCATGGCCGC TGTGTCGGGGGTGTCGCTCG
Product: putative lipase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MVRPLVIIGGYLTSPNDFSALAQALSQPPFDFRVFVTPIGRLRWALTRDWDFRPVLRIVRETVAQALHETGAETVTILAH SVGGTVARMYLGDQPYKGEIYGGHRFVDHLIMLGTPHHSQEFWTRQTVGFTNRSYPGAYYRHIRYTSIIGRSIQANRKGR WIERMAYNSYVMIDGPAGAQAWGDGITTLRCAALAGAEYLVVPGLHHSPIHGRPWYGDPDGLREWQRVLMRSSPLVV
Sequences:
>Translated_237_residues MVRPLVIIGGYLTSPNDFSALAQALSQPPFDFRVFVTPIGRLRWALTRDWDFRPVLRIVRETVAQALHETGAETVTILAH SVGGTVARMYLGDQPYKGEIYGGHRFVDHLIMLGTPHHSQEFWTRQTVGFTNRSYPGAYYRHIRYTSIIGRSIQANRKGR WIERMAYNSYVMIDGPAGAQAWGDGITTLRCAALAGAEYLVVPGLHHSPIHGRPWYGDPDGLREWQRVLMRSSPLVV >Mature_237_residues MVRPLVIIGGYLTSPNDFSALAQALSQPPFDFRVFVTPIGRLRWALTRDWDFRPVLRIVRETVAQALHETGAETVTILAH SVGGTVARMYLGDQPYKGEIYGGHRFVDHLIMLGTPHHSQEFWTRQTVGFTNRSYPGAYYRHIRYTSIIGRSIQANRKGR WIERMAYNSYVMIDGPAGAQAWGDGITTLRCAALAGAEYLVVPGLHHSPIHGRPWYGDPDGLREWQRVLMRSSPLVV
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26731; Mature: 26731
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPLVIIGGYLTSPNDFSALAQALSQPPFDFRVFVTPIGRLRWALTRDWDFRPVLRIVR CCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHH ETVAQALHETGAETVTILAHSVGGTVARMYLGDQPYKGEIYGGHRFVDHLIMLGTPHHSQ HHHHHHHHHCCCCEEEEEEHHHCCCEEEEHHCCCCCCCCEECCHHHHHHHHHCCCCCCCH EFWTRQTVGFTNRSYPGAYYRHIRYTSIIGRSIQANRKGRWIERMAYNSYVMIDGPAGAQ HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCCCC AWGDGITTLRCAALAGAEYLVVPGLHHSPIHGRPWYGDPDGLREWQRVLMRSSPLVV HHCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVRPLVIIGGYLTSPNDFSALAQALSQPPFDFRVFVTPIGRLRWALTRDWDFRPVLRIVR CCCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHH ETVAQALHETGAETVTILAHSVGGTVARMYLGDQPYKGEIYGGHRFVDHLIMLGTPHHSQ HHHHHHHHHCCCCEEEEEEHHHCCCEEEEHHCCCCCCCCEECCHHHHHHHHHCCCCCCCH EFWTRQTVGFTNRSYPGAYYRHIRYTSIIGRSIQANRKGRWIERMAYNSYVMIDGPAGAQ HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEECCCCCC AWGDGITTLRCAALAGAEYLVVPGLHHSPIHGRPWYGDPDGLREWQRVLMRSSPLVV HHCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA