| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523438
Identifier: 222523438
GI number: 222523438
Start: 171432
End: 172118
Strand: Direct
Name: 222523438
Synonym: Chy400_0141
Alternate gene names: NA
Gene position: 171432-172118 (Clockwise)
Preceding gene: 222523437
Following gene: 222523439
Centisome position: 3.25
GC content: 59.53
Gene sequence:
>687_bases ATGACTCGTCCGGTGGTGATCATGGGCGGGTGGCTATCGTCACCCGCCGATTACTTCGGAATGGCGCGCATCCTGGCTGC GCCACCCTACAATCGCATCGTCTACGTTGTCAATTTCAGTCGGCTCGACTGGCTGGCACTGCGTGACCCCAACTTTGGCC CGGCGCTTGATGCCCTGGCAGCAACGGTGCAGATTGCCTTAAGCGAAACTGGCGCCGATACAATTGACTTAATCGGACAC AGCGCCGGTGGCCGGATTGCCCGTGCGTATCTGGCCGATGAGCCATACCAGGGCGTTCGTTATGCCGGACACAAGGTGGT AGCAAGTTTGACAACGTTAGGTACTGCCCACGCCACCTCAGAGGTATGGGTCAAGCAATTTGCCGACTGGCTCGAAGCCC GTTATCCAGGTGCGGCATTTCCCCACATTAGATATCGGGCTGTTGCGGGGCGTAGCGTGCGTGGGCGGCGCTTTGGTTCA CCGGAGGAGATGATTGCCTATCGTTCCTATGAAGTCTCGTTCGGCAACGGCAATCTCATCGGCGACGGTATCGTGCCGAC CGCAGCTTGCTACCTGGCCGGTGCCGACAACCTGATCCTGGAAGGTGCCCGTCACGCACCGTACAACGCACCGGCAACCT GGTACGGGGCACGTGACGTGGTACCACTCTGGTTTGATGCCGGGTGA
Upstream 100 bases:
>100_bases CGATAACGGCAACGGCAGCAGCAACGCCACATCGACTGCGCAAACCGGTTCAGCCGAGACCACGACTGAACCAGAGCGCT CTGAGGATAAAGAGTAAGCT
Downstream 100 bases:
>100_bases GGGTAGGTATGGTTCGTCCATTGGTCATCATCGGTGGGTATCTGACCAGTCCCAACGACTTTAGCGCCCTGGCCCAGGCG CTATCGCAGCCCCCATTTGA
Product: putative lipase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTRPVVIMGGWLSSPADYFGMARILAAPPYNRIVYVVNFSRLDWLALRDPNFGPALDALAATVQIALSETGADTIDLIGH SAGGRIARAYLADEPYQGVRYAGHKVVASLTTLGTAHATSEVWVKQFADWLEARYPGAAFPHIRYRAVAGRSVRGRRFGS PEEMIAYRSYEVSFGNGNLIGDGIVPTAACYLAGADNLILEGARHAPYNAPATWYGARDVVPLWFDAG
Sequences:
>Translated_228_residues MTRPVVIMGGWLSSPADYFGMARILAAPPYNRIVYVVNFSRLDWLALRDPNFGPALDALAATVQIALSETGADTIDLIGH SAGGRIARAYLADEPYQGVRYAGHKVVASLTTLGTAHATSEVWVKQFADWLEARYPGAAFPHIRYRAVAGRSVRGRRFGS PEEMIAYRSYEVSFGNGNLIGDGIVPTAACYLAGADNLILEGARHAPYNAPATWYGARDVVPLWFDAG >Mature_227_residues TRPVVIMGGWLSSPADYFGMARILAAPPYNRIVYVVNFSRLDWLALRDPNFGPALDALAATVQIALSETGADTIDLIGHS AGGRIARAYLADEPYQGVRYAGHKVVASLTTLGTAHATSEVWVKQFADWLEARYPGAAFPHIRYRAVAGRSVRGRRFGSP EEMIAYRSYEVSFGNGNLIGDGIVPTAACYLAGADNLILEGARHAPYNAPATWYGARDVVPLWFDAG
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24692; Mature: 24561
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPVVIMGGWLSSPADYFGMARILAAPPYNRIVYVVNFSRLDWLALRDPNFGPALDALA CCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHH ATVQIALSETGADTIDLIGHSAGGRIARAYLADEPYQGVRYAGHKVVASLTTLGTAHATS HHHHEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHCCHHHHH EVWVKQFADWLEARYPGAAFPHIRYRAVAGRSVRGRRFGSPEEMIAYRSYEVSFGNGNLI HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHEEEEEEEECCCCCEE GDGIVPTAACYLAGADNLILEGARHAPYNAPATWYGARDVVPLWFDAG ECCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCEEEEEECC >Mature Secondary Structure TRPVVIMGGWLSSPADYFGMARILAAPPYNRIVYVVNFSRLDWLALRDPNFGPALDALA CCCEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHH ATVQIALSETGADTIDLIGHSAGGRIARAYLADEPYQGVRYAGHKVVASLTTLGTAHATS HHHHEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHCCHHHHH EVWVKQFADWLEARYPGAAFPHIRYRAVAGRSVRGRRFGSPEEMIAYRSYEVSFGNGNLI HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHEEEEEEEECCCCCEE GDGIVPTAACYLAGADNLILEGARHAPYNAPATWYGARDVVPLWFDAG ECCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA