| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523369
Identifier: 222523369
GI number: 222523369
Start: 77128
End: 77712
Strand: Direct
Name: 222523369
Synonym: Chy400_0070
Alternate gene names: NA
Gene position: 77128-77712 (Clockwise)
Preceding gene: 222523367
Following gene: 222523375
Centisome position: 1.46
GC content: 59.32
Gene sequence:
>585_bases ATGTCGCGTCCGTTCATTCCCATGACCGCCAAGTGGCGGCAAGAGTTTATCAAGCCGCGAGGACCGGCCAATGTGCCCGC AGTTGGTAGCGAGGCACCCGATTTTACGCTTCCGTATGCCCAATTCCTCAGTGGGCCGCCGGAAGATCGGGTTGAATACG GTCGAACGATCACGCTGAGCGCGCTGCGTGGACGGCCCGTTGTCCTCAATCTCACCCGCATTGTCAGTGATCGCTTCTTC TGACCGCACTGCGCGCCGCAACTGGATGCGTTGCGGGAGCACTATGATCTCTTCGTTCAGCGCAATGCGCACCTGCTGGT GGTCAGCAGCACCGATCTCGAAATGACCAGCTACGTCGCCGAGGTGTTGCGTGCGCCGTATCCCATTTTGAGTGATCCCG AATGGGGCGTATTTTACCGCTACGGTATGGGATCGGCGATGGGAGTGCCCTTGCCGGGTGTATTCGTGATCGATGCTGAT GGCATCATCCGCTGGAGCTGGGCTGCACCGTTGTCGGTTGTTTTCACTCCACCACGTCCGGCAGAGCTGGCGGCAGTGCT TGATGCGCTGGCAAGTGAAGGCTGA
Upstream 100 bases:
>100_bases CGAAAGCATAGCTTCCGCGCACCATATGGACAATGCTTCCGCTTTCTGACATATCAGGGTATACTACAAAAAGAGCACTA CAAACCCCAACGGAGGTCGT
Downstream 100 bases:
>100_bases GGCGGTTTCTCCACCTGCCTCAGCCTATACATGTCACTGTCTAATGCTCAGAACGTGTCACACCCGCTCATACCACGAGA ACGACTTAGAAGATCGTTTC
Product: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Antioxidant AhpC/TSA Family; Thiol-Specific Antioxidant Protein; Redoxin; Peroxiredoxin
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSRPFIPMTAKWRQEFIKPRGPANVPAVGSEAPDFTLPYAQFLSGPPEDRVEYGRTITLSALRGRPVVLNLTRIVSDRFF UPHCAPQLDALREHYDLFVQRNAHLLVVSSTDLEMTSYVAEVLRAPYPILSDPEWGVFYRYGMGSAMGVPLPGVFVIDAD GIIRWSWAAPLSVVFTPPRPAELAAVLDALASEG
Sequences:
>Translated_194_residues MSRPFIPMTAKWRQEFIKPRGPANVPAVGSEAPDFTLPYAQFLSGPPEDRVEYGRTITLSALRGRPVVLNLTRIVSDRFF *PHCAPQLDALREHYDLFVQRNAHLLVVSSTDLEMTSYVAEVLRAPYPILSDPEWGVFYRYGMGSAMGVPLPGVFVIDAD GIIRWSWAAPLSVVFTPPRPAELAAVLDALASEG >Mature_193_residues SRPFIPMTAKWRQEFIKPRGPANVPAVGSEAPDFTLPYAQFLSGPPEDRVEYGRTITLSALRGRPVVLNLTRIVSDRFF* PHCAPQLDALREHYDLFVQRNAHLLVVSSTDLEMTSYVAEVLRAPYPILSDPEWGVFYRYGMGSAMGVPLPGVFVIDADG IIRWSWAAPLSVVFTPPRPAELAAVLDALASEG
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21352; Mature: 21221
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPFIPMTAKWRQEFIKPRGPANVPAVGSEAPDFTLPYAQFLSGPPEDRVEYGRTITLS CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCEEEEE ALRGRPVVLNLTRIVSDRFFPHCAPQLDALREHYDLFVQRNAHLLVVSSTDLEMTSYVAE ECCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCEEEEEECCCCHHHHHHHH VLRAPYPILSDPEWGVFYRYGMGSAMGVPLPGVFVIDADGIIRWSWAAPLSVVFTPPRPA HHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEECCCCCH ELAAVLDALASEG HHHHHHHHHHCCC >Mature Secondary Structure SRPFIPMTAKWRQEFIKPRGPANVPAVGSEAPDFTLPYAQFLSGPPEDRVEYGRTITLS CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCEEEEE ALRGRPVVLNLTRIVSDRFFPHCAPQLDALREHYDLFVQRNAHLLVVSSTDLEMTSYVAE ECCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCEEEEEECCCCHHHHHHHH VLRAPYPILSDPEWGVFYRYGMGSAMGVPLPGVFVIDADGIIRWSWAAPLSVVFTPPRPA HHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEECCCCCH ELAAVLDALASEG HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA