| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is regX3 [H]
Identifier: 222523360
GI number: 222523360
Start: 66192
End: 66851
Strand: Direct
Name: regX3 [H]
Synonym: Chy400_0061
Alternate gene names: 222523360
Gene position: 66192-66851 (Clockwise)
Preceding gene: 222523356
Following gene: 222523361
Centisome position: 1.26
GC content: 49.7
Gene sequence:
>660_bases ATGCAATCCGCTCCCGCCCCCCAATTGATCGTCAAACGAAGCAACGGCGATTACCGCGAAATAGTGTGGGATCAACCGGT CATTACCGTTGGCCGTGATGGTGCCAATGACATTATTATCGATCACCCACTCGCATCCCGACGCCACGCACGATTTGAAC GGACTGACGAAGGTTTTTTTATCCGTGATCTTGATAGTACCAACGGCACATTTCTTAACCAGGAACGATTGATCGGCACG CGCAGCCTGCATCACTCCGATCAAATTATGATTGCCGATACGGTTATTATTTTTAACGACCCGGCAGCAACGATGAAGGG AACCCTTGATCCAACACTGTTACGAGCGGTACGCGCTGAAATCCGGGTGGATGAACCAACAAAGTCGGTCTATATTCGCG GTGAGCTGTTATCACCGCCGCTCACCGTGAAAGAGTTTCAGTTACTGGCGTTGCTCTATCGCCGGCAAGGCGAAGTTGTC AGTAAGGAAGAGATCGCCAATCAGGTATGGGATTACGCGATCTTTGATTACAATGCCATTGATGCACTCGTCTATCGCTT GCGGCAGCGCATTGAGCCAGATCCGTCAAAACCAAGGTATCTGATTACCCAGCGCGGTTTTGGTTATAAGCTAATTGTAG CGCCTGAACTTGAGTCATAA
Upstream 100 bases:
>100_bases ATGTCTGCCACAAGCGAAAATGCCATGGTATAATCAGCAAGGTTAAATCGATTGTACCATATCGCATTCGCGCATTCAAA GCTCTGGAGGCTGGTGAACG
Downstream 100 bases:
>100_bases GCGTGAGTTGTCAGACTGGAGTGGAATCACGTAATGAAAGGTATAACGCTAACCGCCCCTAAGCGATTGCGCGGTGTGAT CGAGGTACCGGGCGATAAGT
Product: putative winged helix family two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MQSAPAPQLIVKRSNGDYREIVWDQPVITVGRDGANDIIIDHPLASRRHARFERTDEGFFIRDLDSTNGTFLNQERLIGT RSLHHSDQIMIADTVIIFNDPAATMKGTLDPTLLRAVRAEIRVDEPTKSVYIRGELLSPPLTVKEFQLLALLYRRQGEVV SKEEIANQVWDYAIFDYNAIDALVYRLRQRIEPDPSKPRYLITQRGFGYKLIVAPELES
Sequences:
>Translated_219_residues MQSAPAPQLIVKRSNGDYREIVWDQPVITVGRDGANDIIIDHPLASRRHARFERTDEGFFIRDLDSTNGTFLNQERLIGT RSLHHSDQIMIADTVIIFNDPAATMKGTLDPTLLRAVRAEIRVDEPTKSVYIRGELLSPPLTVKEFQLLALLYRRQGEVV SKEEIANQVWDYAIFDYNAIDALVYRLRQRIEPDPSKPRYLITQRGFGYKLIVAPELES >Mature_219_residues MQSAPAPQLIVKRSNGDYREIVWDQPVITVGRDGANDIIIDHPLASRRHARFERTDEGFFIRDLDSTNGTFLNQERLIGT RSLHHSDQIMIADTVIIFNDPAATMKGTLDPTLLRAVRAEIRVDEPTKSVYIRGELLSPPLTVKEFQLLALLYRRQGEVV SKEEIANQVWDYAIFDYNAIDALVYRLRQRIEPDPSKPRYLITQRGFGYKLIVAPELES
Specific function: Part of the two-component regulatory system senX3/regX3. Once phosphorylated by senX3, activates the expression of several operons/genes involved in phosphate assimilation and metabolism, such as pstSCAB, phnDCE, and phoA [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=94, Percent_Identity=43.6170212765958, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25063; Mature: 25063
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSAPAPQLIVKRSNGDYREIVWDQPVITVGRDGANDIIIDHPLASRRHARFERTDEGFF CCCCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCEEEECCCCCCHHCCCCCCCCCEE IRDLDSTNGTFLNQERLIGTRSLHHSDQIMIADTVIIFNDPAATMKGTLDPTLLRAVRAE EEEECCCCCCEEEHHHHHEECCCCCCCCEEEEEEEEEECCCCHHHCCCCCHHHHHHHHHH IRVDEPTKSVYIRGELLSPPLTVKEFQLLALLYRRQGEVVSKEEIANQVWDYAIFDYNAI EEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCHHH DALVYRLRQRIEPDPSKPRYLITQRGFGYKLIVAPELES HHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCC >Mature Secondary Structure MQSAPAPQLIVKRSNGDYREIVWDQPVITVGRDGANDIIIDHPLASRRHARFERTDEGFF CCCCCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCEEEECCCCCCHHCCCCCCCCCEE IRDLDSTNGTFLNQERLIGTRSLHHSDQIMIADTVIIFNDPAATMKGTLDPTLLRAVRAE EEEECCCCCCEEEHHHHHEECCCCCCCCEEEEEEEEEECCCCHHHCCCCCHHHHHHHHHH IRVDEPTKSVYIRGELLSPPLTVKEFQLLALLYRRQGEVVSKEEIANQVWDYAIFDYNAI EEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCHHH DALVYRLRQRIEPDPSKPRYLITQRGFGYKLIVAPELES HHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA