Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222523358

Identifier: 222523358

GI number: 222523358

Start: 62812

End: 64269

Strand: Reverse

Name: 222523358

Synonym: Chy400_0059

Alternate gene names: NA

Gene position: 64269-62812 (Counterclockwise)

Preceding gene: 222523359

Following gene: 222523357

Centisome position: 1.22

GC content: 56.17

Gene sequence:

>1458_bases
ATGCCAATCGCATTTGTGATAGAAGTGCATGTTCCATATCTCCGTCATCCCGGACGTCAACCGATTGGGGAGGAGCGACT
GCACGCATTCACGGCTCACACGCTTATCCCCCTGCTCGATCTCATTGGTGAATTGCAGCGCCACTCGCTCCCGCTGTCCA
TCACGCTGGCCTGCTCACCGATTGCGCTGGAACAATGGCGTGATCCGGTAGTACACAAGCATTTTGTGCAGTGGCTGGAA
GGGAGGATAACCCACCACCAAAACGAACTCTCTCGTTTCGAGCACGAAGGTAACCAGCATGGGGCATATCTGGCCCGTTT
TTACCTCGATTGGGACCGTCAACTACTGCGTAGTTTCACCATCCGCTATCAGCGCAATCCGCTTGGCCGGCTTCAGGAGC
TGGTAGCAGCCGGGCTGATTACCCCACTCTGCGTACCAGCCAGTTATGCAATCCTGCCTTTCCTTGGGCACGAGGGCATG
GTTCGCGCCCAACTTGAGCACGGCTTGCTCTACATCTCGCGCTACCTCAAGCGACCGGAAGGACTCTGGCTGCCCGGTAG
TGCCTGGCGTGATGGGTTAGAGCGCATTATTCTAGAACTCGATCTACGATATGTGATCGTCGATCCTTCCAATGTCCAAC
TCCAACACGGTCACCTACCCGGCTGGCTTGTACCACGTCGGCTGGCTGCGATTGGGGTAGAGGCTGACCTCGCTCGCCAC
ATTTGGTCGGTGGAACTGGGTTACCCTGGCGATCCGCTCTACCGCAACCCTGCCGATCCAACCGGTTATACCGCCAATGG
AGCCGATGCCCCGCAGCCATACGATCCGTATGATGCGCTACGGCGTGCCCAGGAACATGCCAATCACTTCGTCGATCAAT
TGCTTTTCCGATTGAGCCAGCTTCCATCAGAGACAACGCTGGTAGTACCGATAGATGCACGGCTTTGGAGCAGGAACTGG
TTTGAGGGGCCTACCTGGTTGCAGGCAGTATTAACACGCTGTGCCACCGATCCCCGTCTGCGTCTGACCCAGCCGGGTAG
TCTACTGCACCATCTCTCCAGCAATGATACGGTTGTCCTACAGGCTACAGCGCAGGCAGACGCATCTGCGACCTCCTGGC
AATCGCCATTCACCGACCATTACCGGCAGTCATTGTATGAGGCCGAACGTCGTTTTGCCGAACTGGTGACCTACTATCCG
GCTGCTGAAGGCTTGCGTGAACGAGTCTTAACCCAGGCGGCGCGTGAGCTATTGCTGGCTGAGATGAGTGACTGGCTGAT
GGAGAGTGATCCCGGTTGGCAACGGTATCTTGATCGCTTTGATCACCTTCTGCTCCTTGCCCGTCAGGAATCGCTTAGTG
CAACAGACCTCTTCGCACTGGAGCAGATCGAGAGCCACGACTCCATCTTTCCAGTGCTGAATTACCGTCTTTTTGGCGAA
AAGCATCACAGGTCGTGA

Upstream 100 bases:

>100_bases
GACGCCAACCTAGACACCCTTCCCGACACCAATTGTCGTGACACCGGTATATCCGTAGGAATTGGTTACAGATCGGCCTT
CACCAACAAGCGAGAAAGCA

Downstream 100 bases:

>100_bases
TCACAAATTCAGGTTGCTATGGCCGATGCAGAAACCATTCGCAGCTACGATCAACTGGCCCGTGAACAGGCAGCGTTTCA
ACGGCATCTCCAGCCAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; (1-_4)-Alpha-D-Glucan Branching; Alpha-Amylase; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MPIAFVIEVHVPYLRHPGRQPIGEERLHAFTAHTLIPLLDLIGELQRHSLPLSITLACSPIALEQWRDPVVHKHFVQWLE
GRITHHQNELSRFEHEGNQHGAYLARFYLDWDRQLLRSFTIRYQRNPLGRLQELVAAGLITPLCVPASYAILPFLGHEGM
VRAQLEHGLLYISRYLKRPEGLWLPGSAWRDGLERIILELDLRYVIVDPSNVQLQHGHLPGWLVPRRLAAIGVEADLARH
IWSVELGYPGDPLYRNPADPTGYTANGADAPQPYDPYDALRRAQEHANHFVDQLLFRLSQLPSETTLVVPIDARLWSRNW
FEGPTWLQAVLTRCATDPRLRLTQPGSLLHHLSSNDTVVLQATAQADASATSWQSPFTDHYRQSLYEAERRFAELVTYYP
AAEGLRERVLTQAARELLLAEMSDWLMESDPGWQRYLDRFDHLLLLARQESLSATDLFALEQIESHDSIFPVLNYRLFGE
KHHRS

Sequences:

>Translated_485_residues
MPIAFVIEVHVPYLRHPGRQPIGEERLHAFTAHTLIPLLDLIGELQRHSLPLSITLACSPIALEQWRDPVVHKHFVQWLE
GRITHHQNELSRFEHEGNQHGAYLARFYLDWDRQLLRSFTIRYQRNPLGRLQELVAAGLITPLCVPASYAILPFLGHEGM
VRAQLEHGLLYISRYLKRPEGLWLPGSAWRDGLERIILELDLRYVIVDPSNVQLQHGHLPGWLVPRRLAAIGVEADLARH
IWSVELGYPGDPLYRNPADPTGYTANGADAPQPYDPYDALRRAQEHANHFVDQLLFRLSQLPSETTLVVPIDARLWSRNW
FEGPTWLQAVLTRCATDPRLRLTQPGSLLHHLSSNDTVVLQATAQADASATSWQSPFTDHYRQSLYEAERRFAELVTYYP
AAEGLRERVLTQAARELLLAEMSDWLMESDPGWQRYLDRFDHLLLLARQESLSATDLFALEQIESHDSIFPVLNYRLFGE
KHHRS
>Mature_484_residues
PIAFVIEVHVPYLRHPGRQPIGEERLHAFTAHTLIPLLDLIGELQRHSLPLSITLACSPIALEQWRDPVVHKHFVQWLEG
RITHHQNELSRFEHEGNQHGAYLARFYLDWDRQLLRSFTIRYQRNPLGRLQELVAAGLITPLCVPASYAILPFLGHEGMV
RAQLEHGLLYISRYLKRPEGLWLPGSAWRDGLERIILELDLRYVIVDPSNVQLQHGHLPGWLVPRRLAAIGVEADLARHI
WSVELGYPGDPLYRNPADPTGYTANGADAPQPYDPYDALRRAQEHANHFVDQLLFRLSQLPSETTLVVPIDARLWSRNWF
EGPTWLQAVLTRCATDPRLRLTQPGSLLHHLSSNDTVVLQATAQADASATSWQSPFTDHYRQSLYEAERRFAELVTYYPA
AEGLRERVLTQAARELLLAEMSDWLMESDPGWQRYLDRFDHLLLLARQESLSATDLFALEQIESHDSIFPVLNYRLFGEK
HHRS

Specific function: Unknown

COG id: COG1543

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55747; Mature: 55616

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIAFVIEVHVPYLRHPGRQPIGEERLHAFTAHTLIPLLDLIGELQRHSLPLSITLACSP
CCEEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
IALEQWRDPVVHKHFVQWLEGRITHHQNELSRFEHEGNQHGAYLARFYLDWDRQLLRSFT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IRYQRNPLGRLQELVAAGLITPLCVPASYAILPFLGHEGMVRAQLEHGLLYISRYLKRPE
HHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
GLWLPGSAWRDGLERIILELDLRYVIVDPSNVQLQHGHLPGWLVPRRLAAIGVEADLARH
CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHCCHHHHHHH
IWSVELGYPGDPLYRNPADPTGYTANGADAPQPYDPYDALRRAQEHANHFVDQLLFRLSQ
HEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LPSETTLVVPIDARLWSRNWFEGPTWLQAVLTRCATDPRLRLTQPGSLLHHLSSNDTVVL
CCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCEEEE
QATAQADASATSWQSPFTDHYRQSLYEAERRFAELVTYYPAAEGLRERVLTQAARELLLA
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
EMSDWLMESDPGWQRYLDRFDHLLLLARQESLSATDLFALEQIESHDSIFPVLNYRLFGE
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCH
KHHRS
HHCCC
>Mature Secondary Structure 
PIAFVIEVHVPYLRHPGRQPIGEERLHAFTAHTLIPLLDLIGELQRHSLPLSITLACSP
CEEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
IALEQWRDPVVHKHFVQWLEGRITHHQNELSRFEHEGNQHGAYLARFYLDWDRQLLRSFT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IRYQRNPLGRLQELVAAGLITPLCVPASYAILPFLGHEGMVRAQLEHGLLYISRYLKRPE
HHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
GLWLPGSAWRDGLERIILELDLRYVIVDPSNVQLQHGHLPGWLVPRRLAAIGVEADLARH
CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHCCHHHHHHH
IWSVELGYPGDPLYRNPADPTGYTANGADAPQPYDPYDALRRAQEHANHFVDQLLFRLSQ
HEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LPSETTLVVPIDARLWSRNWFEGPTWLQAVLTRCATDPRLRLTQPGSLLHHLSSNDTVVL
CCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCEEEE
QATAQADASATSWQSPFTDHYRQSLYEAERRFAELVTYYPAAEGLRERVLTQAARELLLA
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
EMSDWLMESDPGWQRYLDRFDHLLLLARQESLSATDLFALEQIESHDSIFPVLNYRLFGE
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCH
KHHRS
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA