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The map label for this gene is 222109211

Identifier: 222109211

GI number: 222109211

Start: 116565

End: 117056

Strand: Direct

Name: 222109211

Synonym: Avi_9645

Alternate gene names: NA

Gene position: 116565-117056 (Clockwise)

Preceding gene: 222109210

Following gene: 222109223

Centisome position: 89.37

GC content: 52.03

Gene sequence:

>492_bases
GTGGACAAAGAGATAGACAGCTTGAAGACGGGAAGAGGATTGGTAAGAAGCCTCGACCCCGAAATTGAAAAGCCGCATTA
TCGAATGGCGATATCGGCTAATGGAGGTCAAGTTCCCTCAATGGGGGAAATGGAAAGAAAGCTGTCTGCATTCTTGCGGA
AGATGCGCGAACAGGCAGGATTAACGCGGGCGGAATTTGCTCCTCTACTTGGCCTGTCCGTCCCTGTGTACAGCAGATAC
GAGCGCGCATTTTCGAAGATTCATGTCACGAGACTCCTTCACGTCTGCGAACTGCTTGGTCTATCTCCGGTCGAAATGTT
ATATGAAGCCGCGCCCCACCTGTGGGGCTCCACTGATGAAGAGGCTGAAGATAGGTTCAGACTTGTGGCGCTCGTTCTCA
AGCTGCCCCACCGGACAACGAGAGACTTGATGCGGATGGTCGAGCATCTGGGGCAAATGGAAAATGGGAGAGTAGCAACC
AAGCCTTATTGA

Upstream 100 bases:

>100_bases
CTGCTTCAAGACCTGACATACTTGACGATTAGGAAGTGGAGCCGTTAATTTCGTATTGTTATCGCGAGGGGCGGCACGCG
TCAGAATTAGGATCGGACTT

Downstream 100 bases:

>100_bases
GATCCATATGTAGTGGCGGTGACTGCGGGCGCGGGGAGTCTCACCCACGTACCCACATTGAACCCGATAAAAATTGCCAG
AGCTCAGCGTTGACATGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix Turn Helix Transcriptional Regulator

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MDKEIDSLKTGRGLVRSLDPEIEKPHYRMAISANGGQVPSMGEMERKLSAFLRKMREQAGLTRAEFAPLLGLSVPVYSRY
ERAFSKIHVTRLLHVCELLGLSPVEMLYEAAPHLWGSTDEEAEDRFRLVALVLKLPHRTTRDLMRMVEHLGQMENGRVAT
KPY

Sequences:

>Translated_163_residues
MDKEIDSLKTGRGLVRSLDPEIEKPHYRMAISANGGQVPSMGEMERKLSAFLRKMREQAGLTRAEFAPLLGLSVPVYSRY
ERAFSKIHVTRLLHVCELLGLSPVEMLYEAAPHLWGSTDEEAEDRFRLVALVLKLPHRTTRDLMRMVEHLGQMENGRVAT
KPY
>Mature_163_residues
MDKEIDSLKTGRGLVRSLDPEIEKPHYRMAISANGGQVPSMGEMERKLSAFLRKMREQAGLTRAEFAPLLGLSVPVYSRY
ERAFSKIHVTRLLHVCELLGLSPVEMLYEAAPHLWGSTDEEAEDRFRLVALVLKLPHRTTRDLMRMVEHLGQMENGRVAT
KPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18575; Mature: 18575

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKEIDSLKTGRGLVRSLDPEIEKPHYRMAISANGGQVPSMGEMERKLSAFLRKMREQAG
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
LTRAEFAPLLGLSVPVYSRYERAFSKIHVTRLLHVCELLGLSPVEMLYEAAPHLWGSTDE
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCH
EAEDRFRLVALVLKLPHRTTRDLMRMVEHLGQMENGRVATKPY
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDKEIDSLKTGRGLVRSLDPEIEKPHYRMAISANGGQVPSMGEMERKLSAFLRKMREQAG
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
LTRAEFAPLLGLSVPVYSRYERAFSKIHVTRLLHVCELLGLSPVEMLYEAAPHLWGSTDE
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCH
EAEDRFRLVALVLKLPHRTTRDLMRMVEHLGQMENGRVATKPY
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA