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The map label for this gene is 222109200

Identifier: 222109200

GI number: 222109200

Start: 85686

End: 87305

Strand: Direct

Name: 222109200

Synonym: Avi_9623

Alternate gene names: NA

Gene position: 85686-87305 (Clockwise)

Preceding gene: 222109199

Following gene: 222109207

Centisome position: 65.69

GC content: 61.91

Gene sequence:

>1620_bases
ATGTCATCGGCTCTTGATCTCAGCCTGTTTCCGGACCTTCCGCCAGAGGTGGTGAAGGCGTTTGCGGCGATGCAGTTCGA
GCTGTCGGTCGAGCGTGCTGCACGTCAGCATGAGCAGGCTGTGGTGGCCGAAAAGGACGCGTTCATCTCCGAGTTGAAGG
AGCTGATCGAGAAGCTTGAGGGGCAGGTTCACGACTACAGGCGCACGAAGTTCGGGCCGAAATCGGAAAAGCTTGATCCG
GCGCAGATGGAACTGGCGCTGGAAGACCTTGAAACGGCGATCGCCGAAACACAGGCGCGGATCGCCGCCGTCGAGGAAAA
GATCGAAGCCAGCGCATCCGATCCGGGCAAGGCGGTTCCTCGCAAGGAGCGCAAGGCCCGTGCACTGCCCGAACACCTGC
CGCGGGTCGAGCGCGTGATCGAGCCCGAGAGCATCGTTTGCCCCTGCGGTTGCGGCAACATGGTTCGGATTGGCGAGGAT
CGGACGGAACGGCTCGACCGGGTCCCGGCACGCTACGAGGTGATCGTCACGATCCGCCCGAAATACGCATGCCCCAAGGG
TCGAACGGGCGTTGTCCAGGCCAAAGCGCCGGCACATCTGCTGGAAGGGAGCTGGCCGACCGAAGCCCTTCTGGCTGAGA
TTGCCGTCTCCAAGCATTCCGAACATATGCCGCTTAACCGGCAGGCTGAGGTCATGGCGCGACACGGGGTGCCGATAGAC
CGCACGGTGCTGGCCGACTGGATGGGCCGCACGGGCAGCGAAATCGCACCGGTGGTCGACCATATGGCCAAACGGCTACT
ATGGGAAAGCACGCGCCTCTATGTCGACGAGACGACCGCCCCGGTGCTGGATCCTGGGCGAGGCAAGACAAAGACCGGCT
ATCTCTGGGCCGTGCTGCGCGACGACCGCGGCTGGAATGGTTCTGCTCCGTCAGGCGTGGTGTTCCATTATCGGCCCGGG
CGTAGAGGAGAATATGCCGCTGAGATCCTCGACGGGTTCAACGGGACAATCCAGGTGGATGCCTACGGCGGCTATTCGCA
CCTCGCCACGTCGGATCGTAACGGTGGCGAACCCTTGAAGCTGGCTTTCTGTTGGGCACATGGGCGTAGAAAGCTGATCA
AGGCCGCGCCTAAGAGCGGATCACCCATCGTCGACGAGGCGCTCATTCGCATCGCCGCGCTATACAAGATCGAAGACAGT
ATCCGAGGTTCAGATCCCGAACATCGCCGGGCAGTTCGACAGGACCTGTCCCTCCCGCTGGTGGACGAGTTCTTCACCTG
GCTGGCAGCCCAGGCCGCGCGCGTCTCACGCAAGTCTGACCTCGGAAAAGCCCTGGCCTATATGCTGACGCGACAGGATG
GCTTCCGGCTGTTCCTGGACGATGGCCATGTCGATATCGACTCCAACCTGGTGGAAAACGCGATCCGCCGCCCGGCCATG
AACCGCCGCAATGCGCTCTTTGCGGGGCACGATGAAGGGGGGCGCAATTGGGCTCGGTTTGCCAGTCTCATCGGCACTTG
CAAAATGAACGGCGTTGAACCTTACACCTATCTGTGCGACCTCTTCACCCGCCTCGCAAACGGCCACCTCGTCAAAGACA
TCGATGCCCTGATGCCCTGA

Upstream 100 bases:

>100_bases
GGCGCAACGGGTGACGGCGCCGTCGGCGGCAGGGTGAATATCCGGCCGCCTTTGCATTGTTTAATTTAGATTTTTTTATG
CTGCTTTGCTATAAAGTCGC

Downstream 100 bases:

>100_bases
TGCCCTGATGCCTTGGGCCTATGCCGCCCGCATCAAGGCCTCACAATGAGCTCGTCAGATACTCGTCGGTGAGCTCACAC
CGGCCCCAAGGCAAAACTAT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MSSALDLSLFPDLPPEVVKAFAAMQFELSVERAARQHEQAVVAEKDAFISELKELIEKLEGQVHDYRRTKFGPKSEKLDP
AQMELALEDLETAIAETQARIAAVEEKIEASASDPGKAVPRKERKARALPEHLPRVERVIEPESIVCPCGCGNMVRIGED
RTERLDRVPARYEVIVTIRPKYACPKGRTGVVQAKAPAHLLEGSWPTEALLAEIAVSKHSEHMPLNRQAEVMARHGVPID
RTVLADWMGRTGSEIAPVVDHMAKRLLWESTRLYVDETTAPVLDPGRGKTKTGYLWAVLRDDRGWNGSAPSGVVFHYRPG
RRGEYAAEILDGFNGTIQVDAYGGYSHLATSDRNGGEPLKLAFCWAHGRRKLIKAAPKSGSPIVDEALIRIAALYKIEDS
IRGSDPEHRRAVRQDLSLPLVDEFFTWLAAQAARVSRKSDLGKALAYMLTRQDGFRLFLDDGHVDIDSNLVENAIRRPAM
NRRNALFAGHDEGGRNWARFASLIGTCKMNGVEPYTYLCDLFTRLANGHLVKDIDALMP

Sequences:

>Translated_539_residues
MSSALDLSLFPDLPPEVVKAFAAMQFELSVERAARQHEQAVVAEKDAFISELKELIEKLEGQVHDYRRTKFGPKSEKLDP
AQMELALEDLETAIAETQARIAAVEEKIEASASDPGKAVPRKERKARALPEHLPRVERVIEPESIVCPCGCGNMVRIGED
RTERLDRVPARYEVIVTIRPKYACPKGRTGVVQAKAPAHLLEGSWPTEALLAEIAVSKHSEHMPLNRQAEVMARHGVPID
RTVLADWMGRTGSEIAPVVDHMAKRLLWESTRLYVDETTAPVLDPGRGKTKTGYLWAVLRDDRGWNGSAPSGVVFHYRPG
RRGEYAAEILDGFNGTIQVDAYGGYSHLATSDRNGGEPLKLAFCWAHGRRKLIKAAPKSGSPIVDEALIRIAALYKIEDS
IRGSDPEHRRAVRQDLSLPLVDEFFTWLAAQAARVSRKSDLGKALAYMLTRQDGFRLFLDDGHVDIDSNLVENAIRRPAM
NRRNALFAGHDEGGRNWARFASLIGTCKMNGVEPYTYLCDLFTRLANGHLVKDIDALMP
>Mature_538_residues
SSALDLSLFPDLPPEVVKAFAAMQFELSVERAARQHEQAVVAEKDAFISELKELIEKLEGQVHDYRRTKFGPKSEKLDPA
QMELALEDLETAIAETQARIAAVEEKIEASASDPGKAVPRKERKARALPEHLPRVERVIEPESIVCPCGCGNMVRIGEDR
TERLDRVPARYEVIVTIRPKYACPKGRTGVVQAKAPAHLLEGSWPTEALLAEIAVSKHSEHMPLNRQAEVMARHGVPIDR
TVLADWMGRTGSEIAPVVDHMAKRLLWESTRLYVDETTAPVLDPGRGKTKTGYLWAVLRDDRGWNGSAPSGVVFHYRPGR
RGEYAAEILDGFNGTIQVDAYGGYSHLATSDRNGGEPLKLAFCWAHGRRKLIKAAPKSGSPIVDEALIRIAALYKIEDSI
RGSDPEHRRAVRQDLSLPLVDEFFTWLAAQAARVSRKSDLGKALAYMLTRQDGFRLFLDDGHVDIDSNLVENAIRRPAMN
RRNALFAGHDEGGRNWARFASLIGTCKMNGVEPYTYLCDLFTRLANGHLVKDIDALMP

Specific function: Unknown

COG id: COG3436

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004291 [H]

Pfam domain/function: PF03050 Transposase_25 [H]

EC number: NA

Molecular weight: Translated: 59919; Mature: 59788

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSALDLSLFPDLPPEVVKAFAAMQFELSVERAARQHEQAVVAEKDAFISELKELIEKLE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQVHDYRRTKFGPKSEKLDPAQMELALEDLETAIAETQARIAAVEEKIEASASDPGKAVP
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
RKERKARALPEHLPRVERVIEPESIVCPCGCGNMVRIGEDRTERLDRVPARYEVIVTIRP
CHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCHHHHHHHCCCCCEEEEEEEEC
KYACPKGRTGVVQAKAPAHLLEGSWPTEALLAEIAVSKHSEHMPLNRQAEVMARHGVPID
CCCCCCCCCCEEECCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCH
RTVLADWMGRTGSEIAPVVDHMAKRLLWESTRLYVDETTAPVLDPGRGKTKTGYLWAVLR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEEEEE
DDRGWNGSAPSGVVFHYRPGRRGEYAAEILDGFNGTIQVDAYGGYSHLATSDRNGGEPLK
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCHHCCCCCCCCCCCEE
LAFCWAHGRRKLIKAAPKSGSPIVDEALIRIAALYKIEDSIRGSDPEHRRAVRQDLSLPL
EEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
VDEFFTWLAAQAARVSRKSDLGKALAYMLTRQDGFRLFLDDGHVDIDSNLVENAIRRPAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCC
NRRNALFAGHDEGGRNWARFASLIGTCKMNGVEPYTYLCDLFTRLANGHLVKDIDALMP
CCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHCC
>Mature Secondary Structure 
SSALDLSLFPDLPPEVVKAFAAMQFELSVERAARQHEQAVVAEKDAFISELKELIEKLE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQVHDYRRTKFGPKSEKLDPAQMELALEDLETAIAETQARIAAVEEKIEASASDPGKAVP
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
RKERKARALPEHLPRVERVIEPESIVCPCGCGNMVRIGEDRTERLDRVPARYEVIVTIRP
CHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCHHHHHHHCCCCCEEEEEEEEC
KYACPKGRTGVVQAKAPAHLLEGSWPTEALLAEIAVSKHSEHMPLNRQAEVMARHGVPID
CCCCCCCCCCEEECCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCH
RTVLADWMGRTGSEIAPVVDHMAKRLLWESTRLYVDETTAPVLDPGRGKTKTGYLWAVLR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEEEEE
DDRGWNGSAPSGVVFHYRPGRRGEYAAEILDGFNGTIQVDAYGGYSHLATSDRNGGEPLK
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCHHCCCCCCCCCCCEE
LAFCWAHGRRKLIKAAPKSGSPIVDEALIRIAALYKIEDSIRGSDPEHRRAVRQDLSLPL
EEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
VDEFFTWLAAQAARVSRKSDLGKALAYMLTRQDGFRLFLDDGHVDIDSNLVENAIRRPAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCC
NRRNALFAGHDEGGRNWARFASLIGTCKMNGVEPYTYLCDLFTRLANGHLVKDIDALMP
CCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]