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The map label for this gene is 222109199

Identifier: 222109199

GI number: 222109199

Start: 85269

End: 85622

Strand: Direct

Name: 222109199

Synonym: Avi_9622

Alternate gene names: NA

Gene position: 85269-85622 (Clockwise)

Preceding gene: 222109198

Following gene: 222109200

Centisome position: 65.37

GC content: 57.63

Gene sequence:

>354_bases
ATGATCGTCGCGGGCCAACGACTGCCGATCCTGATCGCAACGCGTCCGGTTGACTTCCGCTGTGGTCATCAGGCCTTGGC
TCTAATGGTGCAGACCGAATTGAAGCTCGATCCGCATTCTGGGGTGACGGTGATCTTTCGCTCAAAACGCGGGGACCGCC
TAAAAATCCTGGTGTGGGATGGCACCGGAATGGTGCTCATCTACAAAATTCTTGAACATGGAAACTTTGCTTGGCCCAAG
GTTCAGGATGGGACGATGCGTCTTTCCAGGGGTCAATACGAGGCTTTGTTCGAGGGTCTTGACTGGCGGCGGGTCATGGC
GCAACGGGTGACGGCGCCGTCGGCGGCAGGGTGA

Upstream 100 bases:

>100_bases
CTCAGACGTTGTGATGCGGGTTCCTAATGATGTGCCCGTTGAACGGGTCGCCGCTCTGGTTCGCGCTGTGCGAGGAGCGT
CATGATCGTCGCGGGCCGTC

Downstream 100 bases:

>100_bases
ATATCCGGCCGCCTTTGCATTGTTTAATTTAGATTTTTTTATGCTGCTTTGCTATAAAGTCGCATGTCATCGGCTCTTGA
TCTCAGCCTGTTTCCGGACC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MIVAGQRLPILIATRPVDFRCGHQALALMVQTELKLDPHSGVTVIFRSKRGDRLKILVWDGTGMVLIYKILEHGNFAWPK
VQDGTMRLSRGQYEALFEGLDWRRVMAQRVTAPSAAG

Sequences:

>Translated_117_residues
MIVAGQRLPILIATRPVDFRCGHQALALMVQTELKLDPHSGVTVIFRSKRGDRLKILVWDGTGMVLIYKILEHGNFAWPK
VQDGTMRLSRGQYEALFEGLDWRRVMAQRVTAPSAAG
>Mature_117_residues
MIVAGQRLPILIATRPVDFRCGHQALALMVQTELKLDPHSGVTVIFRSKRGDRLKILVWDGTGMVLIYKILEHGNFAWPK
VQDGTMRLSRGQYEALFEGLDWRRVMAQRVTAPSAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 34 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008878 [H]

Pfam domain/function: PF05717 Transposase_34 [H]

EC number: NA

Molecular weight: Translated: 13145; Mature: 13145

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVAGQRLPILIATRPVDFRCGHQALALMVQTELKLDPHSGVTVIFRSKRGDRLKILVWD
CEECCCCCCEEEEECCCCCCCCHHHEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEEC
GTGMVLIYKILEHGNFAWPKVQDGTMRLSRGQYEALFEGLDWRRVMAQRVTAPSAAG
CCCCEEEEEHHHCCCCCCCEECCCEEEECCCCHHHHHCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIVAGQRLPILIATRPVDFRCGHQALALMVQTELKLDPHSGVTVIFRSKRGDRLKILVWD
CEECCCCCCEEEEECCCCCCCCHHHEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEEC
GTGMVLIYKILEHGNFAWPKVQDGTMRLSRGQYEALFEGLDWRRVMAQRVTAPSAAG
CCCCEEEEEHHHCCCCCCCEECCCEEEECCCCHHHHHCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]