Definition Agrobacterium vitis S4 plasmid pAtS4b, complete sequence.
Accession NC_011991
Length 130,435

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The map label for this gene is 222109148

Identifier: 222109148

GI number: 222109148

Start: 36960

End: 37943

Strand: Direct

Name: 222109148

Synonym: Avi_9537

Alternate gene names: NA

Gene position: 36960-37943 (Clockwise)

Preceding gene: 222109147

Following gene: 222109149

Centisome position: 28.34

GC content: 61.69

Gene sequence:

>984_bases
ATGAAGAGAGAGAAAGTCGAAGAACTGAAGGAGAAGGTGAACTGCGGTGCGGTTCTTGAGCAGGCCGGGTTTGCCGTGGA
TATCAAGGAAAGCACCCGGCGGGCGGTAAAGTACCGTAGCGGCTCGGACATCATCATCGTCAACCATGAGGGAAAGGGCT
GGTTCGATCCGCTGAGCGATGCCAAAGGGGACGTCTTTTCTCTTGTCGGACACCTCGACGGCGTGAGCTTTTCCGAATGC
CTTGAGCGGGTCGGTCAGCTCATCGGATTCGATTTCGGTGAACCGGAATGGAAGCCGCATCCAAAAACCACACCGCTCGT
CGGACCCGTATCGGAACGATGGACTTTGCGGCGTAAGCCGTGGCGCGGTTCAGCGACCTGGCGCTACCTGTCGTCGGAGC
GGGCCCTGCCATTCTCTCTGTTACAGGCCGCTGTCGCACGGGACTGCCTGTGCGAAGGTCCCTTCGGCAGTATGTGGGCT
GCTCACACCGATGGCGCCGGTCATGTCACGGGGTGGGAGGAACGCGGGCCGGAATGGCGAGGCTTTGCGACTGGCGGAAC
GAAGATCTTGTTTCGGATTGGTCCACCCGATGCTCTACGGATCTGCGTCACCGAGGCCGCAATCGACGCCATGAGCCTTG
CTGCCATCGAGGGGCTTCGCGACGGCACGATTTATGTCAGCACCGGCGGTGGCTGGTCGCCAACCACGGAAGCCGCGATC
CGGGCACTGGTGTCGCGGCCGGACGTGCAGCTCGTGGCCGCAACCGACGCTAATTCTCAAGGAGAGACGTTTGCCGAACG
ACTGCGCGCACTCGCAGAGGAAGCCGGCTGCGGCTGGATGCGACTGCGGCCGTCCGAAGAGGATTGGAATGAGGTCCTGA
AGACGAGGAGAAAAGAAAGAGAGAGGGACGAGAAAGGCAAGGGTCTGCCGCATTCCCGCCGTCCGCGTCAAGGGAAGCTG
CGCCCCGGCCTTGCCGGCCCTTGA

Upstream 100 bases:

>100_bases
TGCCTCCGGCGCCCTTGCCCCCTTTGATCTTCGCGACTGGGGAAGCGGTTGCCATTAATTTACGCAAAGAAAGGAGGGCC
GGCCGGGCGAGCCGGGCCGT

Downstream 100 bases:

>100_bases
CCCTGCCGGACGCGATGGCGGCCTTACGGAAGGGGTCATGGAGGACTGAAGAGAGACGATACGGTCGAGAGGACGGTGTT
GCGCTTCGGTCTGGACAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKREKVEELKEKVNCGAVLEQAGFAVDIKESTRRAVKYRSGSDIIIVNHEGKGWFDPLSDAKGDVFSLVGHLDGVSFSEC
LERVGQLIGFDFGEPEWKPHPKTTPLVGPVSERWTLRRKPWRGSATWRYLSSERALPFSLLQAAVARDCLCEGPFGSMWA
AHTDGAGHVTGWEERGPEWRGFATGGTKILFRIGPPDALRICVTEAAIDAMSLAAIEGLRDGTIYVSTGGGWSPTTEAAI
RALVSRPDVQLVAATDANSQGETFAERLRALAEEAGCGWMRLRPSEEDWNEVLKTRRKERERDEKGKGLPHSRRPRQGKL
RPGLAGP

Sequences:

>Translated_327_residues
MKREKVEELKEKVNCGAVLEQAGFAVDIKESTRRAVKYRSGSDIIIVNHEGKGWFDPLSDAKGDVFSLVGHLDGVSFSEC
LERVGQLIGFDFGEPEWKPHPKTTPLVGPVSERWTLRRKPWRGSATWRYLSSERALPFSLLQAAVARDCLCEGPFGSMWA
AHTDGAGHVTGWEERGPEWRGFATGGTKILFRIGPPDALRICVTEAAIDAMSLAAIEGLRDGTIYVSTGGGWSPTTEAAI
RALVSRPDVQLVAATDANSQGETFAERLRALAEEAGCGWMRLRPSEEDWNEVLKTRRKERERDEKGKGLPHSRRPRQGKL
RPGLAGP
>Mature_327_residues
MKREKVEELKEKVNCGAVLEQAGFAVDIKESTRRAVKYRSGSDIIIVNHEGKGWFDPLSDAKGDVFSLVGHLDGVSFSEC
LERVGQLIGFDFGEPEWKPHPKTTPLVGPVSERWTLRRKPWRGSATWRYLSSERALPFSLLQAAVARDCLCEGPFGSMWA
AHTDGAGHVTGWEERGPEWRGFATGGTKILFRIGPPDALRICVTEAAIDAMSLAAIEGLRDGTIYVSTGGGWSPTTEAAI
RALVSRPDVQLVAATDANSQGETFAERLRALAEEAGCGWMRLRPSEEDWNEVLKTRRKERERDEKGKGLPHSRRPRQGKL
RPGLAGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36061; Mature: 36061

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKREKVEELKEKVNCGAVLEQAGFAVDIKESTRRAVKYRSGSDIIIVNHEGKGWFDPLSD
CCHHHHHHHHHHHCHHHHHHHCCCEEEEHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
AKGDVFSLVGHLDGVSFSECLERVGQLIGFDFGEPEWKPHPKTTPLVGPVSERWTLRRKP
CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCEECCCC
WRGSATWRYLSSERALPFSLLQAAVARDCLCEGPFGSMWAAHTDGAGHVTGWEERGPEWR
CCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHCCCCCC
GFATGGTKILFRIGPPDALRICVTEAAIDAMSLAAIEGLRDGTIYVSTGGGWSPTTEAAI
EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH
RALVSRPDVQLVAATDANSQGETFAERLRALAEEAGCGWMRLRPSEEDWNEVLKTRRKER
HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH
ERDEKGKGLPHSRRPRQGKLRPGLAGP
HHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKREKVEELKEKVNCGAVLEQAGFAVDIKESTRRAVKYRSGSDIIIVNHEGKGWFDPLSD
CCHHHHHHHHHHHCHHHHHHHCCCEEEEHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
AKGDVFSLVGHLDGVSFSECLERVGQLIGFDFGEPEWKPHPKTTPLVGPVSERWTLRRKP
CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCEECCCC
WRGSATWRYLSSERALPFSLLQAAVARDCLCEGPFGSMWAAHTDGAGHVTGWEERGPEWR
CCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHCCCCCC
GFATGGTKILFRIGPPDALRICVTEAAIDAMSLAAIEGLRDGTIYVSTGGGWSPTTEAAI
EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH
RALVSRPDVQLVAATDANSQGETFAERLRALAEEAGCGWMRLRPSEEDWNEVLKTRRKER
HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH
ERDEKGKGLPHSRRPRQGKLRPGLAGP
HHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA