Definition | Agrobacterium vitis S4 plasmid pAtS4b, complete sequence. |
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Accession | NC_011991 |
Length | 130,435 |
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The map label for this gene is 222109148
Identifier: 222109148
GI number: 222109148
Start: 36960
End: 37943
Strand: Direct
Name: 222109148
Synonym: Avi_9537
Alternate gene names: NA
Gene position: 36960-37943 (Clockwise)
Preceding gene: 222109147
Following gene: 222109149
Centisome position: 28.34
GC content: 61.69
Gene sequence:
>984_bases ATGAAGAGAGAGAAAGTCGAAGAACTGAAGGAGAAGGTGAACTGCGGTGCGGTTCTTGAGCAGGCCGGGTTTGCCGTGGA TATCAAGGAAAGCACCCGGCGGGCGGTAAAGTACCGTAGCGGCTCGGACATCATCATCGTCAACCATGAGGGAAAGGGCT GGTTCGATCCGCTGAGCGATGCCAAAGGGGACGTCTTTTCTCTTGTCGGACACCTCGACGGCGTGAGCTTTTCCGAATGC CTTGAGCGGGTCGGTCAGCTCATCGGATTCGATTTCGGTGAACCGGAATGGAAGCCGCATCCAAAAACCACACCGCTCGT CGGACCCGTATCGGAACGATGGACTTTGCGGCGTAAGCCGTGGCGCGGTTCAGCGACCTGGCGCTACCTGTCGTCGGAGC GGGCCCTGCCATTCTCTCTGTTACAGGCCGCTGTCGCACGGGACTGCCTGTGCGAAGGTCCCTTCGGCAGTATGTGGGCT GCTCACACCGATGGCGCCGGTCATGTCACGGGGTGGGAGGAACGCGGGCCGGAATGGCGAGGCTTTGCGACTGGCGGAAC GAAGATCTTGTTTCGGATTGGTCCACCCGATGCTCTACGGATCTGCGTCACCGAGGCCGCAATCGACGCCATGAGCCTTG CTGCCATCGAGGGGCTTCGCGACGGCACGATTTATGTCAGCACCGGCGGTGGCTGGTCGCCAACCACGGAAGCCGCGATC CGGGCACTGGTGTCGCGGCCGGACGTGCAGCTCGTGGCCGCAACCGACGCTAATTCTCAAGGAGAGACGTTTGCCGAACG ACTGCGCGCACTCGCAGAGGAAGCCGGCTGCGGCTGGATGCGACTGCGGCCGTCCGAAGAGGATTGGAATGAGGTCCTGA AGACGAGGAGAAAAGAAAGAGAGAGGGACGAGAAAGGCAAGGGTCTGCCGCATTCCCGCCGTCCGCGTCAAGGGAAGCTG CGCCCCGGCCTTGCCGGCCCTTGA
Upstream 100 bases:
>100_bases TGCCTCCGGCGCCCTTGCCCCCTTTGATCTTCGCGACTGGGGAAGCGGTTGCCATTAATTTACGCAAAGAAAGGAGGGCC GGCCGGGCGAGCCGGGCCGT
Downstream 100 bases:
>100_bases CCCTGCCGGACGCGATGGCGGCCTTACGGAAGGGGTCATGGAGGACTGAAGAGAGACGATACGGTCGAGAGGACGGTGTT GCGCTTCGGTCTGGACAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MKREKVEELKEKVNCGAVLEQAGFAVDIKESTRRAVKYRSGSDIIIVNHEGKGWFDPLSDAKGDVFSLVGHLDGVSFSEC LERVGQLIGFDFGEPEWKPHPKTTPLVGPVSERWTLRRKPWRGSATWRYLSSERALPFSLLQAAVARDCLCEGPFGSMWA AHTDGAGHVTGWEERGPEWRGFATGGTKILFRIGPPDALRICVTEAAIDAMSLAAIEGLRDGTIYVSTGGGWSPTTEAAI RALVSRPDVQLVAATDANSQGETFAERLRALAEEAGCGWMRLRPSEEDWNEVLKTRRKERERDEKGKGLPHSRRPRQGKL RPGLAGP
Sequences:
>Translated_327_residues MKREKVEELKEKVNCGAVLEQAGFAVDIKESTRRAVKYRSGSDIIIVNHEGKGWFDPLSDAKGDVFSLVGHLDGVSFSEC LERVGQLIGFDFGEPEWKPHPKTTPLVGPVSERWTLRRKPWRGSATWRYLSSERALPFSLLQAAVARDCLCEGPFGSMWA AHTDGAGHVTGWEERGPEWRGFATGGTKILFRIGPPDALRICVTEAAIDAMSLAAIEGLRDGTIYVSTGGGWSPTTEAAI RALVSRPDVQLVAATDANSQGETFAERLRALAEEAGCGWMRLRPSEEDWNEVLKTRRKERERDEKGKGLPHSRRPRQGKL RPGLAGP >Mature_327_residues MKREKVEELKEKVNCGAVLEQAGFAVDIKESTRRAVKYRSGSDIIIVNHEGKGWFDPLSDAKGDVFSLVGHLDGVSFSEC LERVGQLIGFDFGEPEWKPHPKTTPLVGPVSERWTLRRKPWRGSATWRYLSSERALPFSLLQAAVARDCLCEGPFGSMWA AHTDGAGHVTGWEERGPEWRGFATGGTKILFRIGPPDALRICVTEAAIDAMSLAAIEGLRDGTIYVSTGGGWSPTTEAAI RALVSRPDVQLVAATDANSQGETFAERLRALAEEAGCGWMRLRPSEEDWNEVLKTRRKERERDEKGKGLPHSRRPRQGKL RPGLAGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36061; Mature: 36061
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKREKVEELKEKVNCGAVLEQAGFAVDIKESTRRAVKYRSGSDIIIVNHEGKGWFDPLSD CCHHHHHHHHHHHCHHHHHHHCCCEEEEHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC AKGDVFSLVGHLDGVSFSECLERVGQLIGFDFGEPEWKPHPKTTPLVGPVSERWTLRRKP CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCEECCCC WRGSATWRYLSSERALPFSLLQAAVARDCLCEGPFGSMWAAHTDGAGHVTGWEERGPEWR CCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHCCCCCC GFATGGTKILFRIGPPDALRICVTEAAIDAMSLAAIEGLRDGTIYVSTGGGWSPTTEAAI EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH RALVSRPDVQLVAATDANSQGETFAERLRALAEEAGCGWMRLRPSEEDWNEVLKTRRKER HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH ERDEKGKGLPHSRRPRQGKLRPGLAGP HHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKREKVEELKEKVNCGAVLEQAGFAVDIKESTRRAVKYRSGSDIIIVNHEGKGWFDPLSD CCHHHHHHHHHHHCHHHHHHHCCCEEEEHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC AKGDVFSLVGHLDGVSFSECLERVGQLIGFDFGEPEWKPHPKTTPLVGPVSERWTLRRKP CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCEECCCC WRGSATWRYLSSERALPFSLLQAAVARDCLCEGPFGSMWAAHTDGAGHVTGWEERGPEWR CCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHCCCCCC GFATGGTKILFRIGPPDALRICVTEAAIDAMSLAAIEGLRDGTIYVSTGGGWSPTTEAAI EEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH RALVSRPDVQLVAATDANSQGETFAERLRALAEEAGCGWMRLRPSEEDWNEVLKTRRKER HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH ERDEKGKGLPHSRRPRQGKLRPGLAGP HHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA