Click here to switch to the map view.

The map label for this gene is 222109147

Identifier: 222109147

GI number: 222109147

Start: 36609

End: 36917

Strand: Direct

Name: 222109147

Synonym: Avi_9536

Alternate gene names: NA

Gene position: 36609-36917 (Clockwise)

Preceding gene: 222109141

Following gene: 222109148

Centisome position: 28.07

GC content: 55.02

Gene sequence:

>309_bases
CTGAGCGCCGAAGGCCGCCGAAAACGAAAGTTGGGTTTGTCTCGCAAATCTTTTGGGAATTTGACAAGAAGCTCTGGGAC
TCAAGGTCGGAGAAAAAATGCCCTTGAACAAGTCCGGCGAAATTGGACCCTGCCTGACATGATAAACATCCTATCGGAAG
GTTCTCATGCCGCTTGCGACCTGCAGGCGGCAAGGGAAGCTCCGCCACCGTCGGACCTGCGATGTCCCAAACTCCTCACA
CTTTTTTGGCTTGCCTCCGGCGCCCTTGCCCCCTTTGATCTTCGCGACTGGGGAAGCGGTTGCCATTAA

Upstream 100 bases:

>100_bases
TCATGTACCCACATGAACATTCGGTAGTCAATTAAATAACTGGCGATTCAATACGGATATCGCCGAAGCTGGTCCGGCTT
CATATCAAGGCCAACGATCT

Downstream 100 bases:

>100_bases
TTTACGCAAAGAAAGGAGGGCCGGCCGGGCGAGCCGGGCCGTATGAAGAGAGAGAAAGTCGAAGAACTGAAGGAGAAGGT
GAACTGCGGTGCGGTTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MSAEGRRKRKLGLSRKSFGNLTRSSGTQGRRKNALEQVRRNWTLPDMINILSEGSHAACDLQAAREAPPPSDLRCPKLLT
LFWLASGALAPFDLRDWGSGCH

Sequences:

>Translated_102_residues
MSAEGRRKRKLGLSRKSFGNLTRSSGTQGRRKNALEQVRRNWTLPDMINILSEGSHAACDLQAAREAPPPSDLRCPKLLT
LFWLASGALAPFDLRDWGSGCH
>Mature_101_residues
SAEGRRKRKLGLSRKSFGNLTRSSGTQGRRKNALEQVRRNWTLPDMINILSEGSHAACDLQAAREAPPPSDLRCPKLLTL
FWLASGALAPFDLRDWGSGCH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11304; Mature: 11173

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEGRRKRKLGLSRKSFGNLTRSSGTQGRRKNALEQVRRNWTLPDMINILSEGSHAACD
CCCCCCHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHH
LQAAREAPPPSDLRCPKLLTLFWLASGALAPFDLRDWGSGCH
HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAEGRRKRKLGLSRKSFGNLTRSSGTQGRRKNALEQVRRNWTLPDMINILSEGSHAACD
CCCCCHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHH
LQAAREAPPPSDLRCPKLLTLFWLASGALAPFDLRDWGSGCH
HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA