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The map label for this gene is yrkJ [H]

Identifier: 222094532

GI number: 222094532

Start: 852710

End: 853474

Strand: Direct

Name: yrkJ [H]

Synonym: BCQ_0870

Alternate gene names: 222094532

Gene position: 852710-853474 (Clockwise)

Preceding gene: 222094531

Following gene: 222094535

Centisome position: 16.35

GC content: 36.86

Gene sequence:

>765_bases
GTGAGTTTAGTCGTATTACTTTTTATAATTGGGTTTATAGGATCGTTTATATCAGGAATGGTTGGAATTGGCGGTGCGAT
TATTAATTATCCGATGATCTTATACATTCCGGTATTGCTAGGATTTACTGGCTATACTGCACATGAAGTGAGTGGTATTA
CAGCGGTGCAAGTATTCTTTGCAACTTTCGCAGGGGCATGGGCTTATCGGAAAAGTAATGATATGGATAAAACGCTCGTT
GTGTATATGGGAGCTAGTATATTAATAGGAAGTTTCATAGGTAGTTTTGGTGCTAATGCATTAGAGGAACATACGGTCAA
TGTTGTTTATGCAGCGTTAGCAACAATTGCTGCTATTATGATGTTCGTACCGAAACGAAATAATGGTGATGAATTGAAAT
ATAATAAATGGATAGCAAGTTTGTTAGCATTTATTGTAGGCGGAGCATCAGGCATTATAGGTGCTGGAGGTTCGTTCCTT
TTAGTTCCGATTATGCTAGTTATTTTAAAATTGCCGATACGTACAACGATAGCAACATCTATCGCTATTACGTTTATTTC
TTCAGTAGGGATTACAACTGGAAAAGTAATAACTGGACAAGTAGTTGTAATTCCAGCTCTTATTATTGCGATTGCAAGTA
TCTTTGCAGCGCCGCTTGGAGCGCGAGTAGGGAAAAAGATCAATCAAAAAGCACTGCAATATATGTTATCGATTTTGATT
GTAGGTACAGCTATTAAGATGTGGATTGATATGATATTGAAATAA

Upstream 100 bases:

>100_bases
AGAGTTTGCAGGAGTAGGAGCTTATTTAGCAGATGCTTCGGATGGGAATGTGAATTTATTCATTTAAATCACCTTCTTTT
TAGAAGGCGGGGGATATAAG

Downstream 100 bases:

>100_bases
AAGGATGGCGCTGCTTGCAGCCCATCCTTTTATTTATGCCCAAATCACTTTCATTAAGTTTTTATATTCGTCATTTGCTA
ATTTATATAGCATTCTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFTGYTAHEVSGITAVQVFFATFAGAWAYRKSNDMDKTLV
VYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAIMMFVPKRNNGDELKYNKWIASLLAFIVGGASGIIGAGGSFL
LVPIMLVILKLPIRTTIATSIAITFISSVGITTGKVITGQVVVIPALIIAIASIFAAPLGARVGKKINQKALQYMLSILI
VGTAIKMWIDMILK

Sequences:

>Translated_254_residues
MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFTGYTAHEVSGITAVQVFFATFAGAWAYRKSNDMDKTLV
VYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAIMMFVPKRNNGDELKYNKWIASLLAFIVGGASGIIGAGGSFL
LVPIMLVILKLPIRTTIATSIAITFISSVGITTGKVITGQVVVIPALIIAIASIFAAPLGARVGKKINQKALQYMLSILI
VGTAIKMWIDMILK
>Mature_253_residues
SLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFTGYTAHEVSGITAVQVFFATFAGAWAYRKSNDMDKTLVV
YMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAIMMFVPKRNNGDELKYNKWIASLLAFIVGGASGIIGAGGSFLL
VPIMLVILKLPIRTTIATSIAITFISSVGITTGKVITGQVVVIPALIIAIASIFAAPLGARVGKKINQKALQYMLSILIV
GTAIKMWIDMILK

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26826; Mature: 26695

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFTGYTAHEVSGITAVQVFF
CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHH
ATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAIM
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MFVPKRNNGDELKYNKWIASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIATS
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHH
IAITFISSVGITTGKVITGQVVVIPALIIAIASIFAAPLGARVGKKINQKALQYMLSILI
HHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGTAIKMWIDMILK
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SLVVLLFIIGFIGSFISGMVGIGGAIINYPMILYIPVLLGFTGYTAHEVSGITAVQVFF
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHH
ATFAGAWAYRKSNDMDKTLVVYMGASILIGSFIGSFGANALEEHTVNVVYAALATIAAIM
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MFVPKRNNGDELKYNKWIASLLAFIVGGASGIIGAGGSFLLVPIMLVILKLPIRTTIATS
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHH
IAITFISSVGITTGKVITGQVVVIPALIIAIASIFAAPLGARVGKKINQKALQYMLSILI
HHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGTAIKMWIDMILK
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]