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The map label for this gene is yrkF [H]

Identifier: 222094529

GI number: 222094529

Start: 851460

End: 851825

Strand: Direct

Name: yrkF [H]

Synonym: BCQ_0867

Alternate gene names: 222094529

Gene position: 851460-851825 (Clockwise)

Preceding gene: 222094528

Following gene: 222094530

Centisome position: 16.33

GC content: 32.24

Gene sequence:

>366_bases
ATGGATGTGAAGACAATATTGAATATAATCTTAATTGTACTTGTATCATGGTTTATTATTTCTCGATTCTTACCAGCTAG
AGGAGTAAAAAACATTTCAGGAAAAGAATTAAAACGTATGATGGGACAAAATAATAAACAATTTATTGATGTGCGAACAG
CTGGTGAGTATAGAGGGAACAATATTAAAGGGTTTCGGAATATCCCATTAAATGAACTAGCTAATAAGGCGCAACAATTA
GATAAACAGAAAGAAGTTATTGTTCTTTGTCAAAGTGGAATGAGAAGTAAGCAGGCTGCAAAAGTATTAAAAAAATTAGG
ATTTCAGCACGTTATCAATGTTTCAGGCGGTATGAATGGTTTGTGA

Upstream 100 bases:

>100_bases
AATTTAAGTATACGCTTTTTAAGAAAGAAGGGGTTCCATATTCAAAGTTATAGTATGTATTTGGATAGGAAAAAAGTATA
GAAGGAGTTTGAATAGCTTT

Downstream 100 bases:

>100_bases
GGAGGAAATGTAAAATGAAAGAAATGACAGCAAAAGAATTAGAAGAAAAATTGTTACGTAAAGAAGCAGTAAATATCGTA
GACGTACGTGAAGTAGAAGA

Product: rhodanese-like domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MDVKTILNIILIVLVSWFIISRFLPARGVKNISGKELKRMMGQNNKQFIDVRTAGEYRGNNIKGFRNIPLNELANKAQQL
DKQKEVIVLCQSGMRSKQAAKVLKKLGFQHVINVSGGMNGL

Sequences:

>Translated_121_residues
MDVKTILNIILIVLVSWFIISRFLPARGVKNISGKELKRMMGQNNKQFIDVRTAGEYRGNNIKGFRNIPLNELANKAQQL
DKQKEVIVLCQSGMRSKQAAKVLKKLGFQHVINVSGGMNGL
>Mature_121_residues
MDVKTILNIILIVLVSWFIISRFLPARGVKNISGKELKRMMGQNNKQFIDVRTAGEYRGNNIKGFRNIPLNELANKAQQL
DKQKEVIVLCQSGMRSKQAAKVLKKLGFQHVINVSGGMNGL

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 13581; Mature: 13581

Theoretical pI: Translated: 11.27; Mature: 11.27

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKTILNIILIVLVSWFIISRFLPARGVKNISGKELKRMMGQNNKQFIDVRTAGEYRGN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCC
NIKGFRNIPLNELANKAQQLDKQKEVIVLCQSGMRSKQAAKVLKKLGFQHVINVSGGMNG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHCCCCCCCC
L
C
>Mature Secondary Structure
MDVKTILNIILIVLVSWFIISRFLPARGVKNISGKELKRMMGQNNKQFIDVRTAGEYRGN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCC
NIKGFRNIPLNELANKAQQLDKQKEVIVLCQSGMRSKQAAKVLKKLGFQHVINVSGGMNG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHCCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]