Definition | Bacillus cereus Q1 chromosome, complete genome. |
---|---|
Accession | NC_011969 |
Length | 5,214,195 |
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The map label for this gene is rbsC [H]
Identifier: 222094422
GI number: 222094422
Start: 735302
End: 736237
Strand: Direct
Name: rbsC [H]
Synonym: BCQ_0736
Alternate gene names: 222094422
Gene position: 735302-736237 (Clockwise)
Preceding gene: 222094421
Following gene: 222094423
Centisome position: 14.1
GC content: 39.1
Gene sequence:
>936_bases ATGGCTAAGAAGGGGAATGTATTACAACAACTTGGGTCTTTAATTGGACTAGCGCTAATTATTGTAGTAATTACGGCTTT AAATCCAGCGTTTATTGAAATTCCAAATTTATTTAATATACTGCGTCAAGTATCGATTAATGCGCTTATTGCATTCGGAA TGACCTTTGTAATTTTAACAGGGGGTATTGACTTATCGGTAGGTTCTATTTTAGCATTATCAAGTGCACTTGTTGCTGGA ATGATGGCAAGTGGCATGGACCCGTTCCTTGCGATGGCAGTTGGATTATTAGCTGGTCTTGTAATGGGAATTGTAAACGG TATCATCATAGCGAAGGGAAAAGTAGCTCCATTTATTGCGACTTTAGCAACAATGACTATTTTTCGCGGGTTGACGCTTG TTTATATGGACGGACGTCCGATCACTGGTCTTGGTGATCATTTAATGTTCCAAATGTTTGGCCGCGGTTATTTTCTTGGT ATTCCAGTACCAGCTGTTACAATGATGATTGCTTTCGCAGTGCTGTACTTCATTTTGAAGAAAACGACATTTGGTCGCCG TACATTTGCAATTGGTGGAAATGAAGAAGCAGCAGCATTATCAGGTATTAATGTTACGAGAATTAAAGTAATGATTTACG GTCTTTCCGGAATTTTGGCAGCGCTTGCAGGTATTGTCTTAACATCACGACTAGATTCTGCACAGCCGACTGCAGGTACT TCTTACGAATTAGATGCAATTGCAGCAGTTGTATTAGGTGGAACTAGTCTTTCTGGGGGAAGAGGATGGATTGTTGGTAC ATTCATCGGTGTACTTATTATCGGTGTACTAAATAACGGTTTAAATTTATTAGGTGTATCTTCTTTCTTCCAACAAGTTG TAAAAGGACTTGTAATCTTACTAGCTGTATTAATTGATCGCCGAAAAGAAGCGTAA
Upstream 100 bases:
>100_bases GCGTTCTTGTTATTCATGAAGGAAAAGTCGGCGGCATTTTAGAGAAAGATGAGGCATCACAAGAGTCTATTATGGCACTA GCTACAGGGGGAGAGTAAGG
Downstream 100 bases:
>100_bases TGGAGGGACAGTTCATGAAGAAATGGTTACTTATATTCGTTGCATGTATTATGGTCATTACTGCTGGTTGTTCAATGGAA CCACCAGAATGGGCAAAGGA
Product: ribose ABC transporter permease
Products: ADP; phosphate; ribose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAKKGNVLQQLGSLIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVILTGGIDLSVGSILALSSALVAG MMASGMDPFLAMAVGLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRGLTLVYMDGRPITGLGDHLMFQMFGRGYFLG IPVPAVTMMIAFAVLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDSAQPTAGT SYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQVVKGLVILLAVLIDRRKEA
Sequences:
>Translated_311_residues MAKKGNVLQQLGSLIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVILTGGIDLSVGSILALSSALVAG MMASGMDPFLAMAVGLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRGLTLVYMDGRPITGLGDHLMFQMFGRGYFLG IPVPAVTMMIAFAVLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDSAQPTAGT SYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQVVKGLVILLAVLIDRRKEA >Mature_310_residues AKKGNVLQQLGSLIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVILTGGIDLSVGSILALSSALVAGM MASGMDPFLAMAVGLLAGLVMGIVNGIIIAKGKVAPFIATLATMTIFRGLTLVYMDGRPITGLGDHLMFQMFGRGYFLGI PVPAVTMMIAFAVLYFILKKTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDSAQPTAGTS YELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQVVKGLVILLAVLIDRRKEA
Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1172
COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790191, Length=305, Percent_Identity=55.0819672131148, Blast_Score=302, Evalue=2e-83, Organism=Escherichia coli, GI1788896, Length=299, Percent_Identity=41.8060200668896, Blast_Score=207, Evalue=6e-55, Organism=Escherichia coli, GI145693152, Length=306, Percent_Identity=40.8496732026144, Blast_Score=201, Evalue=6e-53, Organism=Escherichia coli, GI1790524, Length=301, Percent_Identity=42.5249169435216, Blast_Score=200, Evalue=8e-53, Organism=Escherichia coli, GI1789992, Length=362, Percent_Identity=33.9779005524862, Blast_Score=165, Evalue=4e-42, Organism=Escherichia coli, GI87082395, Length=287, Percent_Identity=36.5853658536585, Blast_Score=140, Evalue=8e-35, Organism=Escherichia coli, GI1788471, Length=324, Percent_Identity=38.8888888888889, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1787794, Length=295, Percent_Identity=33.8983050847458, Blast_Score=122, Evalue=4e-29, Organism=Escherichia coli, GI145693214, Length=256, Percent_Identity=39.0625, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI1787793, Length=282, Percent_Identity=33.6879432624113, Blast_Score=116, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 32376; Mature: 32244
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKGNVLQQLGSLIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVILT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHC GGIDLSVGSILALSSALVAGMMASGMDPFLAMAVGLLAGLVMGIVNGIIIAKGKVAPFIA CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHH TLATMTIFRGLTLVYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFAVLYFILK HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH KTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDSAQPTAGT HCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQVVKGLVIL CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LAVLIDRRKEA HHHHHHHHCCC >Mature Secondary Structure AKKGNVLQQLGSLIGLALIIVVITALNPAFIEIPNLFNILRQVSINALIAFGMTFVILT CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHC GGIDLSVGSILALSSALVAGMMASGMDPFLAMAVGLLAGLVMGIVNGIIIAKGKVAPFIA CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHH TLATMTIFRGLTLVYMDGRPITGLGDHLMFQMFGRGYFLGIPVPAVTMMIAFAVLYFILK HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH KTTFGRRTFAIGGNEEAAALSGINVTRIKVMIYGLSGILAALAGIVLTSRLDSAQPTAGT HCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SYELDAIAAVVLGGTSLSGGRGWIVGTFIGVLIIGVLNNGLNLLGVSSFFQQVVKGLVIL CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LAVLIDRRKEA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ribose [Periplasm]; H2O [C]
Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7921236; 9353933; 9384377 [H]