Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
---|---|
Accession | NC_011959 |
Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is bglA [H]
Identifier: 221633731
GI number: 221633731
Start: 1763077
End: 1764435
Strand: Reverse
Name: bglA [H]
Synonym: trd_1758
Alternate gene names: 221633731
Gene position: 1764435-1763077 (Counterclockwise)
Preceding gene: 221633732
Following gene: 221633730
Centisome position: 88.09
GC content: 63.43
Gene sequence:
>1359_bases ATGAGCGTGGCCCGTTTCCCGCACGGTTTCCTCTGGGGTACCGCGACTGCTGCATACCAGATAGAAGGTGCGGTAGGCGA GGATGGTCGCGGGCCGTCGATCTGGGACGCCTTCAGCCACGCGCCAGGAAAGACCTATCAGGGGCACACCGGCGATGTCG CCTGCGACCATTATCACCGCTGGCCGGATGATGTCAGGCTCCTCCGTGAACTCGGGGCACCCGCCTATCGCTTCTCGATC GCCTGGCCGCGCGTCTTCCCGGAGGGAACTGGCGCTCCGAACGAACCCGGGCTCACCTTCTACGAGCGATTGGTCGATGC GCTGCTCGAGGCGGGCATCACGCCGTTCGTCACGCTCTATCATTGGGATCTTCCGCAAGCCTTACAGGATCGCGGCGGCT GGAGCGAGCGCTCGACGGCCGAGGCATTCGCTCGCTATGCCGAGGTCGTGACTCGTCGCCTCGGTGATCGGGTGCGCTAC TGGATCACGCACAACGAGCCGTGGGTCGTCGCCTATCTCGGGCACTATCTGGGTGTCCATGCACCAGGTATTCAGGATCT TCCGACGGCGATCCGAGTCAGCCACGAACTGCTGGTCTCGCACGGACTGGCTGCCCAGGCCATCCGGGCAGCGAGTTCTC AGGCAGTGGTCGGTATCACGCTGAACTTGTCGCCGGTCGAGTCAGCGAGCGACCAACCGGACGATCGCGCAGCCGCCCAG CTCTTCGACGGTCTCCTCAACCGATGGTTCCTCGATCCGGTGTTCGGCCGTGGGTATCCGCTCGACGTGCGCGAGCGCCT GGCTCCGTACTTCGACCCACCGGACACCGATCTCCCGACCATCGCGCAGCCGCTCGATTTTCTGGGTATCAACTACTACG CTCCGGCTTTCATCAGAGCTGTTCCCCAGGAGCAGAACCTTTTGGGCTTGGCCCAGCTCGAGCCGAAAGCGTTGGCCGAC CGCGGTTACCAGCTCACCGACATGGGCTGGCCAGTCGTCCCGGAGGGACTCGAGCACTTGTTGCTCCGGATCAGTAGGGA GTATGCGCCGCGCGAGCTGTTCATCACCGAGAACGGTGCCGCCTATCCTGATCAGCTCGTCGCTGGCCGCGTCCAGGATG ACCAGCGCATCGCCTACCTGGCTGCCCACTTCGCTGCCGCCTACCGTGCCGTTCGGGCGGGGGTTCCCCTGAAGGGATAC TTCGTCTGGTCGCTCCTCGACAATTTCGAATGGGCGCACGGCTACAGCAAGCGCTTCGGCATCGTCTACGTCGATTACGA AAGCTTGTCCCGTTTTCCCAAAGCGAGCTTTTCCTGGTACCGCGATATCGTAGCCCGCAACGCGCTCGTCGAGGGATGA
Upstream 100 bases:
>100_bases GCGCCGCCTGGAGGCAGCCAAGGCGATCTTCGAGGCAGTCGAGTAACCCTTACGGTCCTTTGCGGCGGCTGCAGCGGTCC CAGCGAGAAAGGAGAGAGCC
Downstream 100 bases:
>100_bases GCCGGGACGTGGTACACTGCCGCCCGGCAGAGGGAGGTTCGGCGATGCGTTTGAGCCGCGAGATCGTCGATCATGTCGCG ATGCTGGCACGCCTCGGCTT
Product: beta-glucosidase A
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MSVARFPHGFLWGTATAAYQIEGAVGEDGRGPSIWDAFSHAPGKTYQGHTGDVACDHYHRWPDDVRLLRELGAPAYRFSI AWPRVFPEGTGAPNEPGLTFYERLVDALLEAGITPFVTLYHWDLPQALQDRGGWSERSTAEAFARYAEVVTRRLGDRVRY WITHNEPWVVAYLGHYLGVHAPGIQDLPTAIRVSHELLVSHGLAAQAIRAASSQAVVGITLNLSPVESASDQPDDRAAAQ LFDGLLNRWFLDPVFGRGYPLDVRERLAPYFDPPDTDLPTIAQPLDFLGINYYAPAFIRAVPQEQNLLGLAQLEPKALAD RGYQLTDMGWPVVPEGLEHLLLRISREYAPRELFITENGAAYPDQLVAGRVQDDQRIAYLAAHFAAAYRAVRAGVPLKGY FVWSLLDNFEWAHGYSKRFGIVYVDYESLSRFPKASFSWYRDIVARNALVEG
Sequences:
>Translated_452_residues MSVARFPHGFLWGTATAAYQIEGAVGEDGRGPSIWDAFSHAPGKTYQGHTGDVACDHYHRWPDDVRLLRELGAPAYRFSI AWPRVFPEGTGAPNEPGLTFYERLVDALLEAGITPFVTLYHWDLPQALQDRGGWSERSTAEAFARYAEVVTRRLGDRVRY WITHNEPWVVAYLGHYLGVHAPGIQDLPTAIRVSHELLVSHGLAAQAIRAASSQAVVGITLNLSPVESASDQPDDRAAAQ LFDGLLNRWFLDPVFGRGYPLDVRERLAPYFDPPDTDLPTIAQPLDFLGINYYAPAFIRAVPQEQNLLGLAQLEPKALAD RGYQLTDMGWPVVPEGLEHLLLRISREYAPRELFITENGAAYPDQLVAGRVQDDQRIAYLAAHFAAAYRAVRAGVPLKGY FVWSLLDNFEWAHGYSKRFGIVYVDYESLSRFPKASFSWYRDIVARNALVEG >Mature_451_residues SVARFPHGFLWGTATAAYQIEGAVGEDGRGPSIWDAFSHAPGKTYQGHTGDVACDHYHRWPDDVRLLRELGAPAYRFSIA WPRVFPEGTGAPNEPGLTFYERLVDALLEAGITPFVTLYHWDLPQALQDRGGWSERSTAEAFARYAEVVTRRLGDRVRYW ITHNEPWVVAYLGHYLGVHAPGIQDLPTAIRVSHELLVSHGLAAQAIRAASSQAVVGITLNLSPVESASDQPDDRAAAQL FDGLLNRWFLDPVFGRGYPLDVRERLAPYFDPPDTDLPTIAQPLDFLGINYYAPAFIRAVPQEQNLLGLAQLEPKALADR GYQLTDMGWPVVPEGLEHLLLRISREYAPRELFITENGAAYPDQLVAGRVQDDQRIAYLAAHFAAAYRAVRAGVPLKGYF VWSLLDNFEWAHGYSKRFGIVYVDYESLSRFPKASFSWYRDIVARNALVEG
Specific function: Unknown
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI32481206, Length=477, Percent_Identity=39.4129979035639, Blast_Score=307, Evalue=1e-83, Organism=Homo sapiens, GI110681710, Length=481, Percent_Identity=36.3825363825364, Blast_Score=290, Evalue=2e-78, Organism=Homo sapiens, GI13273313, Length=471, Percent_Identity=35.8811040339703, Blast_Score=273, Evalue=2e-73, Organism=Homo sapiens, GI24497614, Length=475, Percent_Identity=35.7894736842105, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI28376633, Length=459, Percent_Identity=32.6797385620915, Blast_Score=212, Evalue=5e-55, Organism=Homo sapiens, GI190360571, Length=86, Percent_Identity=48.8372093023256, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI2367174, Length=479, Percent_Identity=34.446764091858, Blast_Score=238, Evalue=7e-64, Organism=Escherichia coli, GI2367270, Length=472, Percent_Identity=34.1101694915254, Blast_Score=221, Evalue=5e-59, Organism=Escherichia coli, GI1789070, Length=479, Percent_Identity=32.9853862212944, Blast_Score=205, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17552856, Length=480, Percent_Identity=33.5416666666667, Blast_Score=241, Evalue=4e-64, Organism=Caenorhabditis elegans, GI17539390, Length=479, Percent_Identity=32.5678496868476, Blast_Score=232, Evalue=2e-61, Organism=Drosophila melanogaster, GI21356577, Length=481, Percent_Identity=34.0956340956341, Blast_Score=251, Evalue=7e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017736 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 50554; Mature: 50423
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVARFPHGFLWGTATAAYQIEGAVGEDGRGPSIWDAFSHAPGKTYQGHTGDVACDHYHR CCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEECCCCCC WPDDVRLLRELGAPAYRFSIAWPRVFPEGTGAPNEPGLTFYERLVDALLEAGITPFVTLY CCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE HWDLPQALQDRGGWSERSTAEAFARYAEVVTRRLGDRVRYWITHNEPWVVAYLGHYLGVH ECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHCCC APGIQDLPTAIRVSHELLVSHGLAAQAIRAASSQAVVGITLNLSPVESASDQPDDRAAAQ CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHH LFDGLLNRWFLDPVFGRGYPLDVRERLAPYFDPPDTDLPTIAQPLDFLGINYYAPAFIRA HHHHHHHHHHHCHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH VPQEQNLLGLAQLEPKALADRGYQLTDMGWPVVPEGLEHLLLRISREYAPRELFITENGA CCCCCCCEEHHHCCCHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC AYPDQLVAGRVQDDQRIAYLAAHFAAAYRAVRAGVPLKGYFVWSLLDNFEWAHGYSKRFG CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCCCCCCC IVYVDYESLSRFPKASFSWYRDIVARNALVEG EEEEEHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVARFPHGFLWGTATAAYQIEGAVGEDGRGPSIWDAFSHAPGKTYQGHTGDVACDHYHR CCCCCCCCCEEECCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEECCCCCC WPDDVRLLRELGAPAYRFSIAWPRVFPEGTGAPNEPGLTFYERLVDALLEAGITPFVTLY CCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE HWDLPQALQDRGGWSERSTAEAFARYAEVVTRRLGDRVRYWITHNEPWVVAYLGHYLGVH ECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHCCC APGIQDLPTAIRVSHELLVSHGLAAQAIRAASSQAVVGITLNLSPVESASDQPDDRAAAQ CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHH LFDGLLNRWFLDPVFGRGYPLDVRERLAPYFDPPDTDLPTIAQPLDFLGINYYAPAFIRA HHHHHHHHHHHCHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH VPQEQNLLGLAQLEPKALADRGYQLTDMGWPVVPEGLEHLLLRISREYAPRELFITENGA CCCCCCCEEHHHCCCHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC AYPDQLVAGRVQDDQRIAYLAAHFAAAYRAVRAGVPLKGYFVWSLLDNFEWAHGYSKRFG CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCCCCCCC IVYVDYESLSRFPKASFSWYRDIVARNALVEG EEEEEHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1909624 [H]