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The map label for this gene is cdaR [C]

Identifier: 22127722

GI number: 22127722

Start: 4288430

End: 4289557

Strand: Reverse

Name: cdaR [C]

Synonym: y3851

Alternate gene names: 22127722

Gene position: 4289557-4288430 (Counterclockwise)

Preceding gene: 22127723

Following gene: 22127721

Centisome position: 93.24

GC content: 47.25

Gene sequence:

>1128_bases
ATGCCAACCAGCTATCTTAAGGAAGACACCGCTCGCCAAATCGTTCAGCGCACCATGAGCATTATTGATTACTCAGTTAA
TGTCATGAATGAATACGGCGTCATTATTGCGTCTGGTGATCCTCGTCGTTTACATCAGCGTCATGAAGGTGCCGTTTTAG
CGCTGACGGAAAACCGGATGGTCATGATCGACGAAGCCGTGGCTGGCAGGCTTAAAGGCGTTAAACCAGGAATTAACCTG
CCGATTATTTTTCGTCAGCGAATGGTAGGCGTTATTGGGATTTCGGGTGAACCCGATAAAGTGCAGGCCTATGCTGAACT
GGTGCGCATGGCGGCGGAGCTGATTTTAGAACAAGCTGAAATGTTAGAGCAAAATCAGTGGGAAAAACGCTATCGCGAAC
AGTTAACCTCTCAGCTCATTGCTCAGCAAGGCAGTGCGGCTTCAGTGGCATCGATGGCAGCCTATTTAGGATTAGACCTC
ACACTGCCACGCATTGCGCTGATCGTCAGTCTGCGTGAACAAGAGCACACTCAGCAGCGGGATCTGGTCGAAATATTAAG
CAACCACAGCCGTGAAACATTGGTCACCTTACATGGGTTTGAGCGGGTTGTGGTGCTATTGCCGCTGAACCTTGCACACA
GTGACGATCGTGAAGTGACGGCCAGAAAGGCTTTGCGCAAATTGTATGCGCTGCTACAGCCGCGTTTTAGTCTGAATATT
TATGTTGGTGGCATTTTTGATGGCCTGGATGGGCTGCAACGCTCCTATCTTAGCGCACAAGCGATGCAAGAAACGGCATT
GCGACAAAAGCTCACGCAACCGGTCATGTTCTATCAAGACCATTTTTTGACCGTTCTTCTGAATGATTTTGCCGGGAGTT
GGCAGGCTGGTGAACTGAGCTCTGCCTGGCAAACACTGCGTCAGGCAGATACCAAAGACGTTCTGTGTCACACTCTGCGT
TGTTACTTTGTACAGAATTGTGATCTGTCTCAAACGTCAAAACAACTGCATATCCATGTCAATACCCTACGCTATCGGTT
ACAGAAGATTGAAGCTATAACAGCTTTAAAAATCAATGAATTAAGTTCAATTATTCAGCTCTATATTGGCATGAAAATAG
AGAGATAA

Upstream 100 bases:

>100_bases
TTTTATCTTAATAGATAGAATGTCTGACCTTTACCTCAACGCCCATCGCAATTTTCAGCTACATTGATCCCCCCTATCCA
CTCTTAGCCTGTGACAAGTC

Downstream 100 bases:

>100_bases
TTTGTAGCATCCTCCAAAAATCAGCCGTTTTAGCCGTCCATTTTCTGGCGGTTTCACTCAAGCTATTTTTCTCCCGCCCA
CCATAATGGCGACGTTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MPTSYLKEDTARQIVQRTMSIIDYSVNVMNEYGVIIASGDPRRLHQRHEGAVLALTENRMVMIDEAVAGRLKGVKPGINL
PIIFRQRMVGVIGISGEPDKVQAYAELVRMAAELILEQAEMLEQNQWEKRYREQLTSQLIAQQGSAASVASMAAYLGLDL
TLPRIALIVSLREQEHTQQRDLVEILSNHSRETLVTLHGFERVVVLLPLNLAHSDDREVTARKALRKLYALLQPRFSLNI
YVGGIFDGLDGLQRSYLSAQAMQETALRQKLTQPVMFYQDHFLTVLLNDFAGSWQAGELSSAWQTLRQADTKDVLCHTLR
CYFVQNCDLSQTSKQLHIHVNTLRYRLQKIEAITALKINELSSIIQLYIGMKIER

Sequences:

>Translated_375_residues
MPTSYLKEDTARQIVQRTMSIIDYSVNVMNEYGVIIASGDPRRLHQRHEGAVLALTENRMVMIDEAVAGRLKGVKPGINL
PIIFRQRMVGVIGISGEPDKVQAYAELVRMAAELILEQAEMLEQNQWEKRYREQLTSQLIAQQGSAASVASMAAYLGLDL
TLPRIALIVSLREQEHTQQRDLVEILSNHSRETLVTLHGFERVVVLLPLNLAHSDDREVTARKALRKLYALLQPRFSLNI
YVGGIFDGLDGLQRSYLSAQAMQETALRQKLTQPVMFYQDHFLTVLLNDFAGSWQAGELSSAWQTLRQADTKDVLCHTLR
CYFVQNCDLSQTSKQLHIHVNTLRYRLQKIEAITALKINELSSIIQLYIGMKIER
>Mature_374_residues
PTSYLKEDTARQIVQRTMSIIDYSVNVMNEYGVIIASGDPRRLHQRHEGAVLALTENRMVMIDEAVAGRLKGVKPGINLP
IIFRQRMVGVIGISGEPDKVQAYAELVRMAAELILEQAEMLEQNQWEKRYREQLTSQLIAQQGSAASVASMAAYLGLDLT
LPRIALIVSLREQEHTQQRDLVEILSNHSRETLVTLHGFERVVVLLPLNLAHSDDREVTARKALRKLYALLQPRFSLNIY
VGGIFDGLDGLQRSYLSAQAMQETALRQKLTQPVMFYQDHFLTVLLNDFAGSWQAGELSSAWQTLRQADTKDVLCHTLRC
YFVQNCDLSQTSKQLHIHVNTLRYRLQKIEAITALKINELSSIIQLYIGMKIER

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG3835

COG function: function code KT; Sugar diacid utilization regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

Organism=Escherichia coli, GI87081694, Length=387, Percent_Identity=36.4341085271318, Blast_Score=218, Evalue=7e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008599 [H]

Pfam domain/function: PF05651 Diacid_rec [H]

EC number: NA

Molecular weight: Translated: 42587; Mature: 42456

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSYLKEDTARQIVQRTMSIIDYSVNVMNEYGVIIASGDPRRLHQRHEGAVLALTENRM
CCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCHHHHHHHCCCCEEEEECCCE
VMIDEAVAGRLKGVKPGINLPIIFRQRMVGVIGISGEPDKVQAYAELVRMAAELILEQAE
EEEEHHHHHHHCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
MLEQNQWEKRYREQLTSQLIAQQGSAASVASMAAYLGLDLTLPRIALIVSLREQEHTQQR
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DLVEILSNHSRETLVTLHGFERVVVLLPLNLAHSDDREVTARKALRKLYALLQPRFSLNI
HHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
YVGGIFDGLDGLQRSYLSAQAMQETALRQKLTQPVMFYQDHFLTVLLNDFAGSWQAGELS
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHH
SAWQTLRQADTKDVLCHTLRCYFVQNCDLSQTSKQLHIHVNTLRYRLQKIEAITALKINE
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
LSSIIQLYIGMKIER
HHHHHHHHHCCCCCC
>Mature Secondary Structure 
PTSYLKEDTARQIVQRTMSIIDYSVNVMNEYGVIIASGDPRRLHQRHEGAVLALTENRM
CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCCHHHHHHHCCCCEEEEECCCE
VMIDEAVAGRLKGVKPGINLPIIFRQRMVGVIGISGEPDKVQAYAELVRMAAELILEQAE
EEEEHHHHHHHCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
MLEQNQWEKRYREQLTSQLIAQQGSAASVASMAAYLGLDLTLPRIALIVSLREQEHTQQR
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DLVEILSNHSRETLVTLHGFERVVVLLPLNLAHSDDREVTARKALRKLYALLQPRFSLNI
HHHHHHHCCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
YVGGIFDGLDGLQRSYLSAQAMQETALRQKLTQPVMFYQDHFLTVLLNDFAGSWQAGELS
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHH
SAWQTLRQADTKDVLCHTLRCYFVQNCDLSQTSKQLHIHVNTLRYRLQKIEAITALKINE
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
LSSIIQLYIGMKIER
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]