| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is glxK [H]
Identifier: 22127720
GI number: 22127720
Start: 4285837
End: 4286973
Strand: Reverse
Name: glxK [H]
Synonym: y3849
Alternate gene names: 22127720
Gene position: 4286973-4285837 (Counterclockwise)
Preceding gene: 22127721
Following gene: 22127715
Centisome position: 93.18
GC content: 52.86
Gene sequence:
>1137_bases ATGAAAATTATTATTGCTCCCGATTCATTCAAAGAAAGCCTCACCGCCATGCAGGTTGCCGAGGCCATTGAGCAAGGCTT CAGCGAGATTTTCCCGCAGGCAGAATATATAAAGCTGCCAATGGCCGACGGCGGCGAAGGTACCGTTGAATCAATGGTTG CAGCCACTAGCGGAGAGTTAGTTAACGTAGAGGTTACCGGCCCATTAGGTGCTCCGGTTAAGGCCTTTTACGGTTGGATG GGCGATGGCGAAACGGCGGTGATTGAAATGGCGGCGGCATCTGGCCTGCATTTAGTGGCACCAGAGCAGCGCAATCCACT GATTACCACCAGCTACGGTACTGGCGAACTGATTTTGGCGGCACTGAATCACGGGGCGCGCAAAATTATTCTCGGCATCG GAGGCAGTGCCACCAATGACGGCGGCGCAGGTATGATGCAAGCATTGGGCGTACAGCTTCGTGATCAACAAGGTAAAGCG CTCACGGTTGGCGGGGCGGCATTAGCGCAATTGGTCGATATTGATCTCAGCCAGTTGGATGATCGCCTGGCACAAACCGA TATTCTGGTCGCCTGCGATGTAGATAACCCATTGTGTGGTGCGAAAGGCGCATCGGCAGTGTTCGGTCCACAGAAAGGGG CGACGCCAGAACGTGTGCAACAATTGGACGCGGCGTTGCAGCACTATGGTGAAAAAATCGAGCAAGTTACTGGGAAATCC GTCATTAACGTGGCCGGTGCTGGTGCTGCTGGCGGTATGGGCGCGGCGCTGTTCGGTTTACTGAATGCACGGTTACAACC GGGGATTGAGATAGTCACCGAAGCGCTAAAATTAGCGGCTACCGTGCAAAATGCTGATTTAGTCATTACCGGCGAAGGGC GTATCGATAGCCAAACCATTTACGGCAAAACACCGGTCGGGGTGGCGCGAGTCGCGAAGCGTTTTGATATTCCTGTCATT GCTATCGCTGGCAGCATGGCACCGGACTATGAGGTGGTACATCAACATGGGTTAGATGCGGTATTTTCAGTTCTCAACCA TATTCAAACGCTACCAGAAGCACTGGAAGAGGCGAGTGATAATATTCGTATCACGGCGCGTAACGTTGCTGCTGTCTGGA AAATGGGCAGAAGTTAA
Upstream 100 bases:
>100_bases CTAAAACTGCTGCCCTATGAGACCGCCGTGGGTTTGATGATCGCCTTTGTCTCTACGCTGATGTTTGGCGTGTTTAATTT AGCGGGTTAAAGAGGTACGC
Downstream 100 bases:
>100_bases TTTTGCCCACCTGGCTCGCCGCACCTTAAAATACGACAGATAAAATTATAGGCAGCCATAAAAATAGTGATCTCAAAACG TCCATCACCAGGGACTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKIIIAPDSFKESLTAMQVAEAIEQGFSEIFPQAEYIKLPMADGGEGTVESMVAATSGELVNVEVTGPLGAPVKAFYGWM GDGETAVIEMAAASGLHLVAPEQRNPLITTSYGTGELILAALNHGARKIILGIGGSATNDGGAGMMQALGVQLRDQQGKA LTVGGAALAQLVDIDLSQLDDRLAQTDILVACDVDNPLCGAKGASAVFGPQKGATPERVQQLDAALQHYGEKIEQVTGKS VINVAGAGAAGGMGAALFGLLNARLQPGIEIVTEALKLAATVQNADLVITGEGRIDSQTIYGKTPVGVARVAKRFDIPVI AIAGSMAPDYEVVHQHGLDAVFSVLNHIQTLPEALEEASDNIRITARNVAAVWKMGRS
Sequences:
>Translated_378_residues MKIIIAPDSFKESLTAMQVAEAIEQGFSEIFPQAEYIKLPMADGGEGTVESMVAATSGELVNVEVTGPLGAPVKAFYGWM GDGETAVIEMAAASGLHLVAPEQRNPLITTSYGTGELILAALNHGARKIILGIGGSATNDGGAGMMQALGVQLRDQQGKA LTVGGAALAQLVDIDLSQLDDRLAQTDILVACDVDNPLCGAKGASAVFGPQKGATPERVQQLDAALQHYGEKIEQVTGKS VINVAGAGAAGGMGAALFGLLNARLQPGIEIVTEALKLAATVQNADLVITGEGRIDSQTIYGKTPVGVARVAKRFDIPVI AIAGSMAPDYEVVHQHGLDAVFSVLNHIQTLPEALEEASDNIRITARNVAAVWKMGRS >Mature_378_residues MKIIIAPDSFKESLTAMQVAEAIEQGFSEIFPQAEYIKLPMADGGEGTVESMVAATSGELVNVEVTGPLGAPVKAFYGWM GDGETAVIEMAAASGLHLVAPEQRNPLITTSYGTGELILAALNHGARKIILGIGGSATNDGGAGMMQALGVQLRDQQGKA LTVGGAALAQLVDIDLSQLDDRLAQTDILVACDVDNPLCGAKGASAVFGPQKGATPERVQQLDAALQHYGEKIEQVTGKS VINVAGAGAAGGMGAALFGLLNARLQPGIEIVTEALKLAATVQNADLVITGEGRIDSQTIYGKTPVGVARVAKRFDIPVI AIAGSMAPDYEVVHQHGLDAVFSVLNHIQTLPEALEEASDNIRITARNVAAVWKMGRS
Specific function: Glyoxylate catabolism. [C]
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI1786724, Length=377, Percent_Identity=60.2122015915119, Blast_Score=419, Evalue=1e-118, Organism=Escherichia coli, GI145693185, Length=376, Percent_Identity=60.9042553191489, Blast_Score=409, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 39157; Mature: 39157
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIIAPDSFKESLTAMQVAEAIEQGFSEIFPQAEYIKLPMADGGEGTVESMVAATSGEL CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCE VNVEVTGPLGAPVKAFYGWMGDGETAVIEMAAASGLHLVAPEQRNPLITTSYGTGELILA EEEEECCCCCCCHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEECCCCHHHHE ALNHGARKIILGIGGSATNDGGAGMMQALGVQLRDQQGKALTVGGAALAQLVDIDLSQLD ECCCCCEEEEEECCCCCCCCCCHHHHHHHCCCEECCCCCEEEECHHHHHHHHHCCHHHHH DRLAQTDILVACDVDNPLCGAKGASAVFGPQKGATPERVQQLDAALQHYGEKIEQVTGKS HHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH VINVAGAGAAGGMGAALFGLLNARLQPGIEIVTEALKLAATVQNADLVITGEGRIDSQTI HEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEE YGKTPVGVARVAKRFDIPVIAIAGSMAPDYEVVHQHGLDAVFSVLNHIQTLPEALEEASD ECCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC NIRITARNVAAVWKMGRS CEEEEEHHHHHHHHCCCC >Mature Secondary Structure MKIIIAPDSFKESLTAMQVAEAIEQGFSEIFPQAEYIKLPMADGGEGTVESMVAATSGEL CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCE VNVEVTGPLGAPVKAFYGWMGDGETAVIEMAAASGLHLVAPEQRNPLITTSYGTGELILA EEEEECCCCCCCHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEECCCCHHHHE ALNHGARKIILGIGGSATNDGGAGMMQALGVQLRDQQGKALTVGGAALAQLVDIDLSQLD ECCCCCEEEEEECCCCCCCCCCHHHHHHHCCCEECCCCCEEEECHHHHHHHHHCCHHHHH DRLAQTDILVACDVDNPLCGAKGASAVFGPQKGATPERVQQLDAALQHYGEKIEQVTGKS HHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH VINVAGAGAAGGMGAALFGLLNARLQPGIEIVTEALKLAATVQNADLVITGEGRIDSQTI HEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEE YGKTPVGVARVAKRFDIPVIAIAGSMAPDYEVVHQHGLDAVFSVLNHIQTLPEALEEASD ECCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC NIRITARNVAAVWKMGRS CEEEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]