| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yihX [H]
Identifier: 22127673
GI number: 22127673
Start: 4220975
End: 4221565
Strand: Reverse
Name: yihX [H]
Synonym: y3802
Alternate gene names: 22127673
Gene position: 4221565-4220975 (Counterclockwise)
Preceding gene: 22127674
Following gene: 22127672
Centisome position: 91.76
GC content: 44.16
Gene sequence:
>591_bases ATGCTGTATATCTTTGATCTAGGGAATGTGATTGTTGATATCGACTTCAAACGTGTTTTAGGTGTTTGGAGCAAATTAAG CAGTGTTCCGTTGGCTACATTGAACGAGCGTTTTACGATGGGAGAGGTATTTCAGCAACATGAGCGTGGTGAAATCAGCG ACGAGGATTTTGCCCACCAGCTCAGTGATGAAATGGGGATATCCTTGAGTTTCGAGCAGTTCGCTGAGGGTTGGCAGGCG ATATTCGTCGCTTTGCGGCCAGAAGTTATTGATATAATGAATAAATTGCGTCGTGAAGGGAATCGTGTTGTTGTGTTATC GAATACCAACCGCTTACATTGTTATTACTGGCCAGAGCACTATCCTGAAGTCGCTGCTGCTGCTGATCACATGTATTTGT CACAGGATTTGGGAATGCGTAAACCGGAGGCCAGAATTTATCAGCATGTACTGAATGCTGAAAATGTACCGGCAGAGCAG GCCGTGTTCTTTGACGATGTCGAAGCGAATGTACTCGCCGCCAAGGCTGTTGGTATAAATGCTATTCACGTCACCGATAG ACAAATTATTCCTACTTATTTTTCCTTATAA
Upstream 100 bases:
>100_bases TATTATTTTTCCTGCCTGAACCCTCCTTTTTCTCCCTCTCCCTATTCAGTCTTATCTTTTCCCGCTACAGTGAAACTCAC CATCTAATTGGGAGAGCGTT
Downstream 100 bases:
>100_bases TTTCGTGCTCTAATCATTAATGGGTTAGCCTTAGTCGTGCTAACCCTTATCACGCTGGCCCACCCCGAGCTTTATCGTGT TGACAGAGAGACGAATATGG
Product: phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLYIFDLGNVIVDIDFKRVLGVWSKLSSVPLATLNERFTMGEVFQQHERGEISDEDFAHQLSDEMGISLSFEQFAEGWQA IFVALRPEVIDIMNKLRREGNRVVVLSNTNRLHCYYWPEHYPEVAAAADHMYLSQDLGMRKPEARIYQHVLNAENVPAEQ AVFFDDVEANVLAAKAVGINAIHVTDRQIIPTYFSL
Sequences:
>Translated_196_residues MLYIFDLGNVIVDIDFKRVLGVWSKLSSVPLATLNERFTMGEVFQQHERGEISDEDFAHQLSDEMGISLSFEQFAEGWQA IFVALRPEVIDIMNKLRREGNRVVVLSNTNRLHCYYWPEHYPEVAAAADHMYLSQDLGMRKPEARIYQHVLNAENVPAEQ AVFFDDVEANVLAAKAVGINAIHVTDRQIIPTYFSL >Mature_196_residues MLYIFDLGNVIVDIDFKRVLGVWSKLSSVPLATLNERFTMGEVFQQHERGEISDEDFAHQLSDEMGISLSFEQFAEGWQA IFVALRPEVIDIMNKLRREGNRVVVLSNTNRLHCYYWPEHYPEVAAAADHMYLSQDLGMRKPEARIYQHVLNAENVPAEQ AVFFDDVEANVLAAKAVGINAIHVTDRQIIPTYFSL
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate beta-glucose 1-phosphate [H]
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. YihX family [H]
Homologues:
Organism=Escherichia coli, GI87082345, Length=195, Percent_Identity=67.1794871794872, Blast_Score=277, Evalue=4e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 22416; Mature: 22416
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYIFDLGNVIVDIDFKRVLGVWSKLSSVPLATLNERFTMGEVFQQHERGEISDEDFAHQ CEEEEECCCEEEEECHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCCHHHHHH LSDEMGISLSFEQFAEGWQAIFVALRPEVIDIMNKLRREGNRVVVLSNTNRLHCYYWPEH HHHHCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCC YPEVAAAADHMYLSQDLGMRKPEARIYQHVLNAENVPAEQAVFFDDVEANVLAAKAVGIN CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEHHCCCE AIHVTDRQIIPTYFSL EEEECCCEECCHHHCC >Mature Secondary Structure MLYIFDLGNVIVDIDFKRVLGVWSKLSSVPLATLNERFTMGEVFQQHERGEISDEDFAHQ CEEEEECCCEEEEECHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCCCHHHHHH LSDEMGISLSFEQFAEGWQAIFVALRPEVIDIMNKLRREGNRVVVLSNTNRLHCYYWPEH HHHHCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCC YPEVAAAADHMYLSQDLGMRKPEARIYQHVLNAENVPAEQAVFFDDVEANVLAAKAVGIN CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEHHCCCE AIHVTDRQIIPTYFSL EEEECCCEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]