Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is yjjX [C]
Identifier: 22127599
GI number: 22127599
Start: 4139499
End: 4140041
Strand: Direct
Name: yjjX [C]
Synonym: y3725
Alternate gene names: 22127599
Gene position: 4139499-4140041 (Clockwise)
Preceding gene: 22127597
Following gene: 22127602
Centisome position: 89.97
GC content: 49.72
Gene sequence:
>543_bases ATGTACCATGTTATCGCTGCAACTACCAATCCTGCGAAAATTAACGCTATTACCCTCGCCTTTGACGATGTTTACGGCCC TGGCCAATATCGCATTGAAGGTGTCAATGTCGACAGCGGTGTTCCCCTGCAACCCATAGGCAGCACTGAGACACGTATTG GTGCCCGTCAACGGGTTAAGAACGCGCGCCAGGTTCGCCCGGAGGCTGATTTTTGGGTTGGGATTGAAGCAGGCATTGAA GATAATATGACCTTTGCATGGATGGTAGTTGAACACTTACAAGCACGGGGAGAATCCCGTTCTGCCAGTTTAATGCTGCC TGACATTATACTACAAGGGATCCGACAAGGACGTGAACTGGGCGACGAAATGGCGGTTTTAAGCGGTATTTCGAATGTAA AACAGCAAGGCGGCGCAATCGGGATTTTTACCCAAGGTAAATTAACTCGAACCAGTGTCTATCACCAGGCCCTCTTGTTG GCACTGGTGCCGTTCCACAATGAGATTTACCAACGCCCATCGCCCTCTAAACCAGCCATTTAG
Upstream 100 bases:
>100_bases GTAACATGTCATTTTTCCGTTATACTGCGTAAAATAAGCACAAAACCTATCTGAGATAAAACCTATTTTAGATAGGCTTT AAAGGATATTCACACTCATT
Downstream 100 bases:
>100_bases CGTTTGTTGGCTAGCAACTGGGCTTCGAGCCAGCTTTTCAGCTGTGGTGGGGCCGTTTTCAAGCTATTAGAGCCACGGGT GATCGTCGCAATACCTGCAC
Product: NTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVKNARQVRPEADFWVGIEAGIE DNMTFAWMVVEHLQARGESRSASLMLPDIILQGIRQGRELGDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLL ALVPFHNEIYQRPSPSKPAI
Sequences:
>Translated_180_residues MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVKNARQVRPEADFWVGIEAGIE DNMTFAWMVVEHLQARGESRSASLMLPDIILQGIRQGRELGDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLL ALVPFHNEIYQRPSPSKPAI >Mature_180_residues MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVKNARQVRPEADFWVGIEAGIE DNMTFAWMVVEHLQARGESRSASLMLPDIILQGIRQGRELGDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLL ALVPFHNEIYQRPSPSKPAI
Specific function: Unknown
COG id: COG1986
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0244 family
Homologues:
Organism=Escherichia coli, GI87082442, Length=170, Percent_Identity=57.6470588235294, Blast_Score=209, Evalue=9e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3180_YERPP (A4TQH6)
Other databases:
- EMBL: CP000668 - RefSeq: YP_001164511.1 - ProteinModelPortal: A4TQH6 - SMR: A4TQH6 - STRING: A4TQH6 - GeneID: 5062838 - GenomeReviews: CP000668_GR - KEGG: ypp:YPDSF_3180 - eggNOG: COG1986 - HOGENOM: HBG541017 - OMA: ATFAYIA - ProtClustDB: PRK05074 - BioCyc: YPES386656:YPDSF_3180-MONOMER - HAMAP: MF_00648 - InterPro: IPR002786 - TIGRFAMs: TIGR00258
Pfam domain/function: PF01931 DUF84
EC number: NA
Molecular weight: Translated: 19695; Mature: 19695
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVK CEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH NARQVRPEADFWVGIEAGIEDNMTFAWMVVEHLQARGESRSASLMLPDIILQGIRQGREL HHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHH GDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLLALVPFHNEIYQRPSPSKPAI HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MYHVIAATTNPAKINAITLAFDDVYGPGQYRIEGVNVDSGVPLQPIGSTETRIGARQRVK CEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH NARQVRPEADFWVGIEAGIEDNMTFAWMVVEHLQARGESRSASLMLPDIILQGIRQGREL HHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHH GDEMAVLSGISNVKQQGGAIGIFTQGKLTRTSVYHQALLLALVPFHNEIYQRPSPSKPAI HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA