Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is 22127395
Identifier: 22127395
GI number: 22127395
Start: 3904447
End: 3904929
Strand: Direct
Name: 22127395
Synonym: y3521
Alternate gene names: NA
Gene position: 3904447-3904929 (Clockwise)
Preceding gene: 22127392
Following gene: 22127396
Centisome position: 84.87
GC content: 47.62
Gene sequence:
>483_bases TTGAGGAGTAAAAGGCCAAAAATAAATAGCCGAAATAACGCAAGCGGACCATATCCGTTATTTTCCAAGCGACAAAGATG TTGGTTGTTCTCGTTCCCCCAAATCGCTTACTCATGTAAGCACCTTAGGATCTTCGTGATGACCAACGCCCCGCATCTTG AAATCTATAGGTGTATAAGCCCGGCAGATACCGTTACTCTCTCCCATCCGGACTATAACCGTCGGCCCCGGAATTACACC GGGTCTGCTGACCTCTACCTTGCTCTCTTGGATAAGAGAAACAATATGAGCGCTCGCGGGCTTTTGCACCACCGACGTGA CTATATCGTCGCAATACAATTTACCGCCGGTGGGGACTTTCACCCCGCCCTGAGAATAAGCCCCATGACTATAGCGCTAT TGATTCATCTGGGCAATTACCAAAATGCAGAATTAAACCTTGCGTCCAGAGGTTTATACAATCAGCATCGCGCATTATAC TGA
Upstream 100 bases:
>100_bases TCTACACGCTCGACAGGCGTGCCAAAATCTGAGAGAAGCGTCTGATTCATGGTAAAGAAACCTCATTAAAAAATTATGGA TTACCAGAATCAGGGCGGTC
Downstream 100 bases:
>100_bases TCGAGAGTCACCACACATCTACTTAGGGAAATATCATGATTGACCCGAAAAAAATTGAGCAAATCGCCCGCCAGGTGCAT GAATCTATGCCAAAAGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MRSKRPKINSRNNASGPYPLFSKRQRCWLFSFPQIAYSCKHLRIFVMTNAPHLEIYRCISPADTVTLSHPDYNRRPRNYT GSADLYLALLDKRNNMSARGLLHHRRDYIVAIQFTAGGDFHPALRISPMTIALLIHLGNYQNAELNLASRGLYNQHRALY
Sequences:
>Translated_160_residues MRSKRPKINSRNNASGPYPLFSKRQRCWLFSFPQIAYSCKHLRIFVMTNAPHLEIYRCISPADTVTLSHPDYNRRPRNYT GSADLYLALLDKRNNMSARGLLHHRRDYIVAIQFTAGGDFHPALRISPMTIALLIHLGNYQNAELNLASRGLYNQHRALY >Mature_160_residues MRSKRPKINSRNNASGPYPLFSKRQRCWLFSFPQIAYSCKHLRIFVMTNAPHLEIYRCISPADTVTLSHPDYNRRPRNYT GSADLYLALLDKRNNMSARGLLHHRRDYIVAIQFTAGGDFHPALRISPMTIALLIHLGNYQNAELNLASRGLYNQHRALY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18502; Mature: 18502
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSKRPKINSRNNASGPYPLFSKRQRCWLFSFPQIAYSCKHLRIFVMTNAPHLEIYRCIS CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHCCCEEEEEEEECCCCEEEEEECC PADTVTLSHPDYNRRPRNYTGSADLYLALLDKRNNMSARGLLHHRRDYIVAIQFTAGGDF CCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCCEEEEEEEECCCCC HPALRISPMTIALLIHLGNYQNAELNLASRGLYNQHRALY CCEEEECCEEEEEEEEECCCCCCEEEEHHCCCCCCCCCCC >Mature Secondary Structure MRSKRPKINSRNNASGPYPLFSKRQRCWLFSFPQIAYSCKHLRIFVMTNAPHLEIYRCIS CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHCCCEEEEEEEECCCCEEEEEECC PADTVTLSHPDYNRRPRNYTGSADLYLALLDKRNNMSARGLLHHRRDYIVAIQFTAGGDF CCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCCEEEEEEEECCCCC HPALRISPMTIALLIHLGNYQNAELNLASRGLYNQHRALY CCEEEECCEEEEEEEEECCCCCCEEEEHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA