Click here to switch to the map view.

The map label for this gene is yieP [H]

Identifier: 22123933

GI number: 22123933

Start: 10766

End: 11455

Strand: Reverse

Name: yieP [H]

Synonym: y0011

Alternate gene names: 22123933

Gene position: 11455-10766 (Counterclockwise)

Preceding gene: 22123936

Following gene: 22123932

Centisome position: 0.25

GC content: 44.06

Gene sequence:

>690_bases
ATGCAACTAAATACCCAACAGCAAGCCGCCCAGCGAAATCTTTCCTACTTACTGGCTGAAAAGATTGGTCAGCGTATTCT
CGCAGGAGAATATGAAGCGGGCAGTATACTGCCCGGCGAAATAGAGTTGGGTGAACAATTTGGTGTAAGTCGCACCGCAG
TACGTGAAGCAGTAAAAATGCTGGCAGCGAAGGGGATGCTATTACCGCGCCCGCGTATTGGCACTCGTGTTATGCCACAG
ACGAATTGGAACTACCTTGATCAGGAATTATTAACGTGGTGGATGACCAAGGAGAATTTTGATCAGGTCATGCAACACTT
CCTTATACTAAGAACATCGTTGGAACCACAAGCCTGTTATCTGGCTGCCACACACGCCAATGAGAAACAGCGAGAGCTGT
TAGCATCACTAGTTGCAGAAATGCGTGCACTGCATAGCAACTTTAATCGTGAGCAATGGATTCAGGTGGATACCCAGTTT
CATAAATTAATTTATGAAGCCAGCGGCAATCCATTTTTAATCTCTTTTGCTAACTTATTCAGTTCGGTTTATTACAGCTA
CTTTCGTGCTATTACTGGTGATGAAGTGATTAAGCTACAACATCATCAGAACATTGTAGATACGATTCTGGCAGGTGATA
ATCAAGGTGCTTTATTCGCCTGTCAGGTGCTATTAAAAACGGTAGACTGA

Upstream 100 bases:

>100_bases
AAAGGACAATCCTTAAACAATTATTAAGCTAAACATCCAATACCGAAGTGAAACAGTAGAGTAAAATAGAAATATAAGAA
GACTGATAGGACAAATCACC

Downstream 100 bases:

>100_bases
CGACAGCACGATCAGCCACATGCTATCTATATAAAGAAGAGAAAATTATCGCCCCCCATATAAATCACCAGGACGGATAA
TGATAAAATCTGCGCGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MQLNTQQQAAQRNLSYLLAEKIGQRILAGEYEAGSILPGEIELGEQFGVSRTAVREAVKMLAAKGMLLPRPRIGTRVMPQ
TNWNYLDQELLTWWMTKENFDQVMQHFLILRTSLEPQACYLAATHANEKQRELLASLVAEMRALHSNFNREQWIQVDTQF
HKLIYEASGNPFLISFANLFSSVYYSYFRAITGDEVIKLQHHQNIVDTILAGDNQGALFACQVLLKTVD

Sequences:

>Translated_229_residues
MQLNTQQQAAQRNLSYLLAEKIGQRILAGEYEAGSILPGEIELGEQFGVSRTAVREAVKMLAAKGMLLPRPRIGTRVMPQ
TNWNYLDQELLTWWMTKENFDQVMQHFLILRTSLEPQACYLAATHANEKQRELLASLVAEMRALHSNFNREQWIQVDTQF
HKLIYEASGNPFLISFANLFSSVYYSYFRAITGDEVIKLQHHQNIVDTILAGDNQGALFACQVLLKTVD
>Mature_229_residues
MQLNTQQQAAQRNLSYLLAEKIGQRILAGEYEAGSILPGEIELGEQFGVSRTAVREAVKMLAAKGMLLPRPRIGTRVMPQ
TNWNYLDQELLTWWMTKENFDQVMQHFLILRTSLEPQACYLAATHANEKQRELLASLVAEMRALHSNFNREQWIQVDTQF
HKLIYEASGNPFLISFANLFSSVYYSYFRAITGDEVIKLQHHQNIVDTILAGDNQGALFACQVLLKTVD

Specific function: Unknown

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=229, Percent_Identity=67.6855895196507, Blast_Score=329, Evalue=1e-91,
Organism=Escherichia coli, GI48994955, Length=210, Percent_Identity=29.5238095238095, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1790032, Length=231, Percent_Identity=30.7359307359307, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26135; Mature: 26135

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLNTQQQAAQRNLSYLLAEKIGQRILAGEYEAGSILPGEIELGEQFGVSRTAVREAVKM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHH
LAAKGMLLPRPRIGTRVMPQTNWNYLDQELLTWWMTKENFDQVMQHFLILRTSLEPQACY
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEE
LAATHANEKQRELLASLVAEMRALHSNFNREQWIQVDTQFHKLIYEASGNPFLISFANLF
EEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH
SSVYYSYFRAITGDEVIKLQHHQNIVDTILAGDNQGALFACQVLLKTVD
HHHHHHHHHHHCCCHHEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQLNTQQQAAQRNLSYLLAEKIGQRILAGEYEAGSILPGEIELGEQFGVSRTAVREAVKM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHH
LAAKGMLLPRPRIGTRVMPQTNWNYLDQELLTWWMTKENFDQVMQHFLILRTSLEPQACY
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEE
LAATHANEKQRELLASLVAEMRALHSNFNREQWIQVDTQFHKLIYEASGNPFLISFANLF
EEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH
SSVYYSYFRAITGDEVIKLQHHQNIVDTILAGDNQGALFACQVLLKTVD
HHHHHHHHHHHCCCHHEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]