Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
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Accession | NC_011900 |
Length | 2,221,315 |
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The map label for this gene is gltX [H]
Identifier: 221232783
GI number: 221232783
Start: 2034124
End: 2035584
Strand: Reverse
Name: gltX [H]
Synonym: SPN23F_20940
Alternate gene names: 221232783
Gene position: 2035584-2034124 (Counterclockwise)
Preceding gene: 221232784
Following gene: 221232782
Centisome position: 91.64
GC content: 40.59
Gene sequence:
>1461_bases ATGTCAAAAGATATCCGCGTACGTTACGCACCAAGTCCAACAGGACTACTACACATCGGAAATGCCCGTACAGCATTGTT TAACTACTTGTATGCGCGCCATCATGGTGGAACATTTCTCATCCGTATCGAAGATACTGACCGTAAACGCCATGTCGAGG ATGGTGAACGTTCACAACTTGAAAACCTTCGCTGGTTAGGCATGGATTGGGATGAAAGTCCAGAATCACATGAGAATTAT CGCCAGTCTGAGCGTTTGGACTTGTATCAAAAATACATTGACCAACTATTAGCTGAAGGAAAAGCCTATAAATCTTACGT TACAGAAGAAGAGTTGGCAGCTGAACGTGAACGTCAAGAAGTAGCTGGCGAAACACCACGCTACATCAATGAATACCTTG GTATGAGTGAAGAAGAAAAAGCGGCTTATATCGCAGAACGTGAAGCAGCTGGTATCATACCAACAGTTCGTTTGGCTGTC AATGAGTCAGGTATCTACAAGTGGCATGATATGGTCAAAGGTGATATCGAATTTGAAGGTGGCAATATCGGCGGTGACTG GGTTATCCAAAAGAAAGACGGTTACCCAACTTACAACTTTGCCGTTGTTATCGATGACCACGATATGCAAATCTCTCATG TTATCCGTGGAGATGACCATATTGCTAATACACCAAAACAGCTTATGGTCTATGAAGCTCTTGGTTGGGAAGCTCCAGAG TTTGGTCACATGACCTTGATTATCAACTCTGAGACTGGTAAGAAGTTATCTAAACGTGATACTAATACACTTCAATTTAT CGAAGATTACCGAAAGAAAGGTTACCTTCCAGAAGCAGTCTTTAACTTTATTGCTCTTCTTGGTTGGAACCCAGGTGGTG AAGATGAGATTTTCTCTCGTGAAGAACTCATTAAACTTTTTGATGAAAACCGCCTCAGCAAGTCACCAGCAGCCTTTGAT CAGAAAAAATTAGACTGGATGAGCAATGATTATATCAAGAATGCAGACCTTGAAACCATCTTTGAAATGGCAAAACCATT CTTAGAGGAAGCAGGCCGTTTGACTGACAAGGCTGAAAAATTAGTTGAGCTCTATAAACCACAAATGAAATCAGTAGATG AGATTATCCCATTGACAGATCTTTTCTTCTCAGATTTCCCAGAATTGACAGAAGCAGAGCGCGAAGTCATGACGGGTGAA ACAGTTCCAACAGTTCTTGAAGCATTCAAAGCAAAACTTGAAGCGATGACAGATGATGAATTTGTGACAGAAAATATCTT CCCACAAATTAAAGCAGTCCAAAAAGAAACAGGTATTAAAGGGAAAAATCTTTTCATGCCTATTCGTATCGCAGTTTCAG GCGAAATGCATGGGCCAGAATTACCAGATACAATTTTCTTGCTTGGACGTGAAAAATCAATTCAGCATATCGAAAACATT CTAAAAGAAATCTCTAAATAA
Upstream 100 bases:
>100_bases ACTCTTTTTACTCTCTTTATCCATAGAAATTGGACTCAGCCAAGACTTGTGATATAATATAGAAAGCAAAAAGGCAGACG CCTAGATAATAGGAGAAACT
Downstream 100 bases:
>100_bases AGAGGATACAATAATGGACATCTGGGAAAAGATGTACGAAGAAGCACAGAAACTATACAATCCACATGAAGTATCAGACT TTGTTTATGCCAATCATGTT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MSKDIRVRYAPSPTGLLHIGNARTALFNYLYARHHGGTFLIRIEDTDRKRHVEDGERSQLENLRWLGMDWDESPESHENY RQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERERQEVAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAV NESGIYKWHDMVKGDIEFEGGNIGGDWVIQKKDGYPTYNFAVVIDDHDMQISHVIRGDDHIANTPKQLMVYEALGWEAPE FGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYLPEAVFNFIALLGWNPGGEDEIFSREELIKLFDENRLSKSPAAFD QKKLDWMSNDYIKNADLETIFEMAKPFLEEAGRLTDKAEKLVELYKPQMKSVDEIIPLTDLFFSDFPELTEAEREVMTGE TVPTVLEAFKAKLEAMTDDEFVTENIFPQIKAVQKETGIKGKNLFMPIRIAVSGEMHGPELPDTIFLLGREKSIQHIENI LKEISK
Sequences:
>Translated_486_residues MSKDIRVRYAPSPTGLLHIGNARTALFNYLYARHHGGTFLIRIEDTDRKRHVEDGERSQLENLRWLGMDWDESPESHENY RQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERERQEVAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAV NESGIYKWHDMVKGDIEFEGGNIGGDWVIQKKDGYPTYNFAVVIDDHDMQISHVIRGDDHIANTPKQLMVYEALGWEAPE FGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYLPEAVFNFIALLGWNPGGEDEIFSREELIKLFDENRLSKSPAAFD QKKLDWMSNDYIKNADLETIFEMAKPFLEEAGRLTDKAEKLVELYKPQMKSVDEIIPLTDLFFSDFPELTEAEREVMTGE TVPTVLEAFKAKLEAMTDDEFVTENIFPQIKAVQKETGIKGKNLFMPIRIAVSGEMHGPELPDTIFLLGREKSIQHIENI LKEISK >Mature_485_residues SKDIRVRYAPSPTGLLHIGNARTALFNYLYARHHGGTFLIRIEDTDRKRHVEDGERSQLENLRWLGMDWDESPESHENYR QSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERERQEVAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVN ESGIYKWHDMVKGDIEFEGGNIGGDWVIQKKDGYPTYNFAVVIDDHDMQISHVIRGDDHIANTPKQLMVYEALGWEAPEF GHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYLPEAVFNFIALLGWNPGGEDEIFSREELIKLFDENRLSKSPAAFDQ KKLDWMSNDYIKNADLETIFEMAKPFLEEAGRLTDKAEKLVELYKPQMKSVDEIIPLTDLFFSDFPELTEAEREVMTGET VPTVLEAFKAKLEAMTDDEFVTENIFPQIKAVQKETGIKGKNLFMPIRIAVSGEMHGPELPDTIFLLGREKSIQHIENIL KEISK
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=498, Percent_Identity=29.9196787148594, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI62241042, Length=258, Percent_Identity=26.7441860465116, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI4826960, Length=298, Percent_Identity=24.8322147651007, Blast_Score=76, Evalue=7e-14, Organism=Escherichia coli, GI1788743, Length=485, Percent_Identity=38.3505154639175, Blast_Score=329, Evalue=3e-91, Organism=Escherichia coli, GI226510925, Length=253, Percent_Identity=30.0395256916996, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI1786895, Length=217, Percent_Identity=25.8064516129032, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71993394, Length=503, Percent_Identity=30.8151093439364, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17543332, Length=298, Percent_Identity=25.8389261744966, Blast_Score=72, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6324540, Length=496, Percent_Identity=32.6612903225806, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6321192, Length=218, Percent_Identity=27.5229357798165, Blast_Score=80, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6324742, Length=310, Percent_Identity=24.1935483870968, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI24665321, Length=503, Percent_Identity=30.4174950298211, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI17864488, Length=300, Percent_Identity=27.6666666666667, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 55910; Mature: 55779
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDIRVRYAPSPTGLLHIGNARTALFNYLYARHHGGTFLIRIEDTDRKRHVEDGERSQL CCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCCCCHHHH ENLRWLGMDWDESPESHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERERQE HCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHH VAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEFEG HCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCEEEECC GNIGGDWVIQKKDGYPTYNFAVVIDDHDMQISHVIRGDDHIANTPKQLMVYEALGWEAPE CCCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCHHCCCHHHHHEEHHHCCCCCC FGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYLPEAVFNFIALLGWNPGGEDEIFSR CCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHCH EELIKLFDENRLSKSPAAFDQKKLDWMSNDYIKNADLETIFEMAKPFLEEAGRLTDKAEK HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH LVELYKPQMKSVDEIIPLTDLFFSDFPELTEAEREVMTGETVPTVLEAFKAKLEAMTDDE HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH FVTENIFPQIKAVQKETGIKGKNLFMPIRIAVSGEMHGPELPDTIFLLGREKSIQHIENI HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHH LKEISK HHHHCC >Mature Secondary Structure SKDIRVRYAPSPTGLLHIGNARTALFNYLYARHHGGTFLIRIEDTDRKRHVEDGERSQL CCCCEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCCCCHHHH ENLRWLGMDWDESPESHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERERQE HCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHH VAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEFEG HCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCEEEECC GNIGGDWVIQKKDGYPTYNFAVVIDDHDMQISHVIRGDDHIANTPKQLMVYEALGWEAPE CCCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCHHCCCHHHHHEEHHHCCCCCC FGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYLPEAVFNFIALLGWNPGGEDEIFSR CCCEEEEEECCCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHCH EELIKLFDENRLSKSPAAFDQKKLDWMSNDYIKNADLETIFEMAKPFLEEAGRLTDKAEK HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH LVELYKPQMKSVDEIIPLTDLFFSDFPELTEAEREVMTGETVPTVLEAFKAKLEAMTDDE HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH FVTENIFPQIKAVQKETGIKGKNLFMPIRIAVSGEMHGPELPDTIFLLGREKSIQHIENI HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHH LKEISK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA