Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
---|---|
Accession | NC_011900 |
Length | 2,221,315 |
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The map label for this gene is purR
Identifier: 221232703
GI number: 221232703
Start: 1940797
End: 1941624
Strand: Reverse
Name: purR
Synonym: SPN23F_19990
Alternate gene names: 221232703
Gene position: 1941624-1940797 (Counterclockwise)
Preceding gene: 221232704
Following gene: 221232702
Centisome position: 87.41
GC content: 42.15
Gene sequence:
>828_bases ATGAAATTAAGAAGAAGTGATCGGATGGTTGTCATTTCCAACTATTTGATTAATAATCCTTATAAACTAACTAGTCTCAA TACTTTTGCTGAAAAGTATGAGTCTGCTAAATCATCCATCTCAGAAGATATCGTCATTATCAAACGCGCCTTTGAGGAAA TTGAAATCGGTCATATCCAGACAGTGACTGGGGCTGGCGGAGGTGTCATCTTCACACCGTCTATTTCGAGTCAGGATGCT AAGGAAATGGTTGAAGACTTGCGTACCAAGTTGTCAGAAAGTGACCGTATCTTGCCAGGTGGTTATATCTATCTGTCTGA TTTGCTTAGCACACCAGCCATCTTGAAAAATATTGGTCGTATTATTGCCAAAAGCTTTATGGACCAAAAAATTGACGCGG TTATGACCGTAGCAACTAAGGGTGTGCCACTTGCAAATGCAGTTGCCAATGTCCTCAATGTCTCTTTTGTCATTGTGCGC CGTGACCTGAAAATTACCGAAGGTTCAACTGTTAGCGTCAACTATGTTTCAGGTTCAAGTGGTGACCGTATCGAGAAAAT GTTCCTTTCAAAACGTAGTCTTAAGGCAGGTAGCCGTGTCTTGATTGTGGATGACTTCTTGAAAGGTGGCGGAACGGTCA ACGGTATGATTAGTCTCTTGCGCGAGTTCGACTCAGAACTGGCAGGTGTAGCGGTCTTTGCGGACAATGCCCAAGAAGAA CGTGAAAAGCAGTTTGACTACAAGTCACTCTTGAAGGTAACTAATATTGATGTCAAGAACCAAGCCATCGATGTTGAGGT TGGCAATATCTTTGACGAAGATAAATAA
Upstream 100 bases:
>100_bases AGTTCTATTGACAATCTCAAAACAGTGTTTTGAACCACCAGCGACCAGCTTTCTAGTTTGCTTTTTGATTTTTTGAATAA AAATGGAATAGGAAATAGAA
Downstream 100 bases:
>100_bases GAGATAGAACTAAAGGTTGGAACGATTGTCCCAGCCTTTCTTTGCAAACAGAATAGAAGGAAGCTTATGAAAACACCATT TATCAATAGAGAAGAGTTAG
Product: pur operon repressor
Products: AMP; Diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKLRRSDRMVVISNYLINNPYKLTSLNTFAEKYESAKSSISEDIVIIKRAFEEIEIGHIQTVTGAGGGVIFTPSISSQDA KEMVEDLRTKLSESDRILPGGYIYLSDLLSTPAILKNIGRIIAKSFMDQKIDAVMTVATKGVPLANAVANVLNVSFVIVR RDLKITEGSTVSVNYVSGSSGDRIEKMFLSKRSLKAGSRVLIVDDFLKGGGTVNGMISLLREFDSELAGVAVFADNAQEE REKQFDYKSLLKVTNIDVKNQAIDVEVGNIFDEDK
Sequences:
>Translated_275_residues MKLRRSDRMVVISNYLINNPYKLTSLNTFAEKYESAKSSISEDIVIIKRAFEEIEIGHIQTVTGAGGGVIFTPSISSQDA KEMVEDLRTKLSESDRILPGGYIYLSDLLSTPAILKNIGRIIAKSFMDQKIDAVMTVATKGVPLANAVANVLNVSFVIVR RDLKITEGSTVSVNYVSGSSGDRIEKMFLSKRSLKAGSRVLIVDDFLKGGGTVNGMISLLREFDSELAGVAVFADNAQEE REKQFDYKSLLKVTNIDVKNQAIDVEVGNIFDEDK >Mature_275_residues MKLRRSDRMVVISNYLINNPYKLTSLNTFAEKYESAKSSISEDIVIIKRAFEEIEIGHIQTVTGAGGGVIFTPSISSQDA KEMVEDLRTKLSESDRILPGGYIYLSDLLSTPAILKNIGRIIAKSFMDQKIDAVMTVATKGVPLANAVANVLNVSFVIVR RDLKITEGSTVSVNYVSGSSGDRIEKMFLSKRSLKAGSRVLIVDDFLKGGGTVNGMISLLREFDSELAGVAVFADNAQEE REKQFDYKSLLKVTNIDVKNQAIDVEVGNIFDEDK
Specific function: Controls the transcription of the pur operon for purine biosynthetic genes
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURR_STRPN (P65832)
Other databases:
- EMBL: AE005672 - PIR: E95231 - RefSeq: NP_346406.1 - ProteinModelPortal: P65832 - SMR: P65832 - EnsemblBacteria: EBSTRT00000025159 - GeneID: 929904 - GenomeReviews: AE005672_GR - KEGG: spn:SP_1979 - TIGR: SP_1979 - GeneTree: EBGT00050000026781 - HOGENOM: HBG304155 - OMA: EQQGIGT - ProtClustDB: PRK09213 - BioCyc: SPNE170187-1:SP_1979-MONOMER - GO: GO:0006350 - InterPro: IPR000836 - InterPro: IPR015265 - InterPro: IPR010078 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10 - ProDom: PD029816 - TIGRFAMs: TIGR01743
Pfam domain/function: PF00156 Pribosyltran; PF09182 PuR_N
EC number: 2.4.2.7 [C]
Molecular weight: Translated: 30227; Mature: 30227
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRRSDRMVVISNYLINNPYKLTSLNTFAEKYESAKSSISEDIVIIKRAFEEIEIGHIQ CCCCCCCCEEEEEHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE TVTGAGGGVIFTPSISSQDAKEMVEDLRTKLSESDRILPGGYIYLSDLLSTPAILKNIGR EEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHH IIAKSFMDQKIDAVMTVATKGVPLANAVANVLNVSFVIVRRDLKITEGSTVSVNYVSGSS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEECEEEECCCEEEEEEEECCC GDRIEKMFLSKRSLKAGSRVLIVDDFLKGGGTVNGMISLLREFDSELAGVAVFADNAQEE CHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHCEEEEEECCCHHH REKQFDYKSLLKVTNIDVKNQAIDVEVGNIFDEDK HHHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MKLRRSDRMVVISNYLINNPYKLTSLNTFAEKYESAKSSISEDIVIIKRAFEEIEIGHIQ CCCCCCCCEEEEEHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE TVTGAGGGVIFTPSISSQDAKEMVEDLRTKLSESDRILPGGYIYLSDLLSTPAILKNIGR EEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHH IIAKSFMDQKIDAVMTVATKGVPLANAVANVLNVSFVIVRRDLKITEGSTVSVNYVSGSS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEECEEEECCCEEEEEEEECCC GDRIEKMFLSKRSLKAGSRVLIVDDFLKGGGTVNGMISLLREFDSELAGVAVFADNAQEE CHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHCEEEEEECCCHHH REKQFDYKSLLKVTNIDVKNQAIDVEVGNIFDEDK HHHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): 560 [C]
Specific activity: 14
Km value (mM): 0.02 {adenine}} 0.125 {5-phospho-alpha-D-ribose} [C]
Substrates: Adenine; 5-Phospho-alpha-D-ribose 1-diphosphate [C]
Specific reaction: Adenine + 5-Phospho-alpha-D-ribose 1-diphosphate --> AMP + Diphosphate [C]
General reaction: Pentosyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11463916