Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
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Accession | NC_011900 |
Length | 2,221,315 |
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The map label for this gene is yhaP [H]
Identifier: 221232453
GI number: 221232453
Start: 1659416
End: 1660615
Strand: Reverse
Name: yhaP [H]
Synonym: SPN23F_17180
Alternate gene names: 221232453
Gene position: 1660615-1659416 (Counterclockwise)
Preceding gene: 221232454
Following gene: 221232449
Centisome position: 74.76
GC content: 39.92
Gene sequence:
>1200_bases ATGAGAAATATGTGGGTTGTAATCAAGGAAACCTATCTTCGACATGTCGAGTCATGGAGTTTCTTCTTTATGGTGATTTC GCCGTTCCTCTTTTTAGGAATCTCTGTAGGAATTGGGCATCTCCAAGGTTCTTCTATGGCTAAAAATAATAAAGTGGCAG TAGTGACAACAGTGCCATCTGTAGCAGAAGGACTGAAGAATGTAAATGGTGTTAACTTCGACTATAAAGACGAAGCAAGT GCCAAAGAAGCAATTAAAGAAGAAAAATTAAAAGGTTATTTGACCATTGATCAAGAAGATAGTGTTCTAAAGGCAGTTTA TCATGGCGAAACATCGCTTGAAAATGGAATTAAATTTGAGGTTACAGGTACACTCAATGAACTGCAAAATCAGCTTAATC GTTCAACTGCTTCCTTGTCTCAAGAGCAGGAAAAACGCTTAGCGCAGACAATTCAATTCACAGAAAAGATTGATGAAGCC AAGGAAAATAAAAAGTTTATTCAAACAATTGCAGCAGGTGCCTTAGGATTCTTTCTTTATATGATTCTGATTACCTATGC GGGTGTAACAGCTCAGGAAGTTGCCAGTGAAAAAGGCACCAAAATTATGGAAGTCGTCTTTTCTAGCATAAGGGCAAGTC ACTATTTCTATGCGCGGATGATGGCTCTGTTTCTAGTGATTTTAACGCATATTGGGATCTATGTTGTAGGTGGTCTGGCT GCCGTTTTGCTCTTTAAAGATTTGCCATTCTTGGCTCAGTCTGGTATTTTGGATCACTTGGGAGATGCTATCTCACTGAA TACCTTGCTCTTTATTTTGATCAGTCTTTTCATGTACGTAGTCTTGGCAGCCTTCCTAGGATCTATGGTTTCTCGTCCTG AAGACTCAGGGAAAGCCTTGTCGCCTTTGATGATTTTGATTATGGGTGGTTTTTTTGGAGTGACAGCTCTAGGTGCAGCT GGTGACAATCTCCTCTTGAAGATTGGTTCTTATATTCCCTTTATTTCGACCTTCTTTATGCCGTTTCGAACGATTAATGG CTATGCGGAGGGAGCGGAAGCATGGATTTCACTTGCTATTACAGTGATTTTTGCGGTGGTAGCAACAGGATTTATCGGAC GCATGTATGCTAGTCTCGTTCTTCAAACGGATGATTTAGGGATTTGGAAAACCTTTAAACGTGCCTTATCTTATAAATAG
Upstream 100 bases:
>100_bases AACTCTTCCCAATCTTGACTCAAGGTCAATATATCGCAACATTTGACCAACAAGCGCCAACTATCGATGAAATCTTTAAA CTAGAATCAGGAGTGGAAGT
Downstream 100 bases:
>100_bases AAGAGCCTTGCGAAAGCGAGGTTTTTAAAGGTGAAAAGGGTGGAATCACGAACCTAATTATGTACACATTATGTAAACAG GTTGCTTGAAAACTCAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRNMWVVIKETYLRHVESWSFFFMVISPFLFLGISVGIGHLQGSSMAKNNKVAVVTTVPSVAEGLKNVNGVNFDYKDEAS AKEAIKEEKLKGYLTIDQEDSVLKAVYHGETSLENGIKFEVTGTLNELQNQLNRSTASLSQEQEKRLAQTIQFTEKIDEA KENKKFIQTIAAGALGFFLYMILITYAGVTAQEVASEKGTKIMEVVFSSIRASHYFYARMMALFLVILTHIGIYVVGGLA AVLLFKDLPFLAQSGILDHLGDAISLNTLLFILISLFMYVVLAAFLGSMVSRPEDSGKALSPLMILIMGGFFGVTALGAA GDNLLLKIGSYIPFISTFFMPFRTINGYAEGAEAWISLAITVIFAVVATGFIGRMYASLVLQTDDLGIWKTFKRALSYK
Sequences:
>Translated_399_residues MRNMWVVIKETYLRHVESWSFFFMVISPFLFLGISVGIGHLQGSSMAKNNKVAVVTTVPSVAEGLKNVNGVNFDYKDEAS AKEAIKEEKLKGYLTIDQEDSVLKAVYHGETSLENGIKFEVTGTLNELQNQLNRSTASLSQEQEKRLAQTIQFTEKIDEA KENKKFIQTIAAGALGFFLYMILITYAGVTAQEVASEKGTKIMEVVFSSIRASHYFYARMMALFLVILTHIGIYVVGGLA AVLLFKDLPFLAQSGILDHLGDAISLNTLLFILISLFMYVVLAAFLGSMVSRPEDSGKALSPLMILIMGGFFGVTALGAA GDNLLLKIGSYIPFISTFFMPFRTINGYAEGAEAWISLAITVIFAVVATGFIGRMYASLVLQTDDLGIWKTFKRALSYK >Mature_399_residues MRNMWVVIKETYLRHVESWSFFFMVISPFLFLGISVGIGHLQGSSMAKNNKVAVVTTVPSVAEGLKNVNGVNFDYKDEAS AKEAIKEEKLKGYLTIDQEDSVLKAVYHGETSLENGIKFEVTGTLNELQNQLNRSTASLSQEQEKRLAQTIQFTEKIDEA KENKKFIQTIAAGALGFFLYMILITYAGVTAQEVASEKGTKIMEVVFSSIRASHYFYARMMALFLVILTHIGIYVVGGLA AVLLFKDLPFLAQSGILDHLGDAISLNTLLFILISLFMYVVLAAFLGSMVSRPEDSGKALSPLMILIMGGFFGVTALGAA GDNLLLKIGSYIPFISTFFMPFRTINGYAEGAEAWISLAITVIFAVVATGFIGRMYASLVLQTDDLGIWKTFKRALSYK
Specific function: Unknown
COG id: COG1668
COG function: function code CP; ABC-type Na+ efflux pump, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1024 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43951; Mature: 43951
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNMWVVIKETYLRHVESWSFFFMVISPFLFLGISVGIGHLQGSSMAKNNKVAVVTTVPS CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHH VAEGLKNVNGVNFDYKDEASAKEAIKEEKLKGYLTIDQEDSVLKAVYHGETSLENGIKFE HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCHHHCCCCEEE VTGTLNELQNQLNRSTASLSQEQEKRLAQTIQFTEKIDEAKENKKFIQTIAAGALGFFLY EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MILITYAGVTAQEVASEKGTKIMEVVFSSIRASHYFYARMMALFLVILTHIGIYVVGGLA HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLLFKDLPFLAQSGILDHLGDAISLNTLLFILISLFMYVVLAAFLGSMVSRPEDSGKAL HHHHHHCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH SPLMILIMGGFFGVTALGAAGDNLLLKIGSYIPFISTFFMPFRTINGYAEGAEAWISLAI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TVIFAVVATGFIGRMYASLVLQTDDLGIWKTFKRALSYK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRNMWVVIKETYLRHVESWSFFFMVISPFLFLGISVGIGHLQGSSMAKNNKVAVVTTVPS CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHH VAEGLKNVNGVNFDYKDEASAKEAIKEEKLKGYLTIDQEDSVLKAVYHGETSLENGIKFE HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCHHHCCCCEEE VTGTLNELQNQLNRSTASLSQEQEKRLAQTIQFTEKIDEAKENKKFIQTIAAGALGFFLY EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MILITYAGVTAQEVASEKGTKIMEVVFSSIRASHYFYARMMALFLVILTHIGIYVVGGLA HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLLFKDLPFLAQSGILDHLGDAISLNTLLFILISLFMYVVLAAFLGSMVSRPEDSGKAL HHHHHHCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH SPLMILIMGGFFGVTALGAAGDNLLLKIGSYIPFISTFFMPFRTINGYAEGAEAWISLAI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TVIFAVVATGFIGRMYASLVLQTDDLGIWKTFKRALSYK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]