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The map label for this gene is yurN [H]

Identifier: 221232418

GI number: 221232418

Start: 1620486

End: 1621382

Strand: Reverse

Name: yurN [H]

Synonym: SPN23F_16820

Alternate gene names: 221232418

Gene position: 1621382-1620486 (Counterclockwise)

Preceding gene: 221232419

Following gene: 221232417

Centisome position: 72.99

GC content: 38.91

Gene sequence:

>897_bases
GTGCCGACTGTGAAAGTCAATAAAATCCGTATGCGGGAAACAGTGATTTCCTATGCTTTCCTAGCACCAGTGTTGTTCTT
CTTTGTCATCTTTGTATTGGCTCCAATGATTATGGGCTTTATTACAAGTTTCTTTAACTACTCTATGACTAGCTTTGAAT
TTGTGGGCTTAGATAACTATATCCGTATGTTTAAAGATCCTGTCTTTACAAAATCTTTGATTAACACAGTTATTTTGGTT
ATTGGATCTGTGCCAGTTGTTGTTCTATTCTCACTCTTTGTAGCGTCACAGACCTACCATCAAAATGCTATCGCTAGATC
ATTCTATCGTTTCGTATTCTTCCTTCCAGTTGTTACAGGTAGTGTTGCCGTAACAGTTGTATGGAAATGGATTTATGACC
CACTATCAGGGATTCTAAACTTTGTCCTTAAGTCCAGCCACATCATCAGCCAAAACATTTCTTGGTTGGGAGATAAAAAC
TGGGCATTGATGGCGATTATGATTATTCTCTTGACCACTTCAGTTGGTCAGCCCATCATCCTTTATATCGCTGCCATGGG
GAATATTGACAATTCACTGGTTGAAGCGGCGCGTGTTGATGGTGCAACTGAGTTTCAAGTTTTTTGGAAGATTAAATGGC
CAAGCCTTCTTCCAACAACTCTTTATATTGCAATCATCACAACAATTAACTCATTCCAGTGTTTTGCCTTGATTCAGCTT
TTGACATCTGGTGGTCCAAACTACTCAACAAGTACCTTGATGTACTACCTTTACGAAAAAGCCTTCCAATTGACAGAATA
CGGCTATGCCAACACAATTGGTGTCTTCTTGGCAATCATGATTGCTATCGTAAGCTTTGTTCAATTTAAAGTACTTGGAA
ACGACGTAGAATACTAA

Upstream 100 bases:

>100_bases
AAATTAAAATGAAGTTCTTACATAAGTGAATCATAAAAAATTTCATTTTGATTTTAAAACAGTTCAAGAAAGTCAAAAAA
TTATTCTATTTGAAAGAGAG

Downstream 100 bases:

>100_bases
AGAAAGGAGACAGCTATGCAATCTACAGAAAAAAAACCATTAACAGCCTTTACTGTTATTTCAACAATCATTTTGCTCTT
GTTGACTGTGCTGTTCATCT

Product: transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MPTVKVNKIRMRETVISYAFLAPVLFFFVIFVLAPMIMGFITSFFNYSMTSFEFVGLDNYIRMFKDPVFTKSLINTVILV
IGSVPVVVLFSLFVASQTYHQNAIARSFYRFVFFLPVVTGSVAVTVVWKWIYDPLSGILNFVLKSSHIISQNISWLGDKN
WALMAIMIILLTTSVGQPIILYIAAMGNIDNSLVEAARVDGATEFQVFWKIKWPSLLPTTLYIAIITTINSFQCFALIQL
LTSGGPNYSTSTLMYYLYEKAFQLTEYGYANTIGVFLAIMIAIVSFVQFKVLGNDVEY

Sequences:

>Translated_298_residues
MPTVKVNKIRMRETVISYAFLAPVLFFFVIFVLAPMIMGFITSFFNYSMTSFEFVGLDNYIRMFKDPVFTKSLINTVILV
IGSVPVVVLFSLFVASQTYHQNAIARSFYRFVFFLPVVTGSVAVTVVWKWIYDPLSGILNFVLKSSHIISQNISWLGDKN
WALMAIMIILLTTSVGQPIILYIAAMGNIDNSLVEAARVDGATEFQVFWKIKWPSLLPTTLYIAIITTINSFQCFALIQL
LTSGGPNYSTSTLMYYLYEKAFQLTEYGYANTIGVFLAIMIAIVSFVQFKVLGNDVEY
>Mature_297_residues
PTVKVNKIRMRETVISYAFLAPVLFFFVIFVLAPMIMGFITSFFNYSMTSFEFVGLDNYIRMFKDPVFTKSLINTVILVI
GSVPVVVLFSLFVASQTYHQNAIARSFYRFVFFLPVVTGSVAVTVVWKWIYDPLSGILNFVLKSSHIISQNISWLGDKNW
ALMAIMIILLTTSVGQPIILYIAAMGNIDNSLVEAARVDGATEFQVFWKIKWPSLLPTTLYIAIITTINSFQCFALIQLL
TSGGPNYSTSTLMYYLYEKAFQLTEYGYANTIGVFLAIMIAIVSFVQFKVLGNDVEY

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=293, Percent_Identity=25.5972696245734, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1787570, Length=255, Percent_Identity=28.6274509803922, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=26.7716535433071, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33674; Mature: 33543

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVKVNKIRMRETVISYAFLAPVLFFFVIFVLAPMIMGFITSFFNYSMTSFEFVGLDNY
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHH
IRMFKDPVFTKSLINTVILVIGSVPVVVLFSLFVASQTYHQNAIARSFYRFVFFLPVVTG
HHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SVAVTVVWKWIYDPLSGILNFVLKSSHIISQNISWLGDKNWALMAIMIILLTTSVGQPII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCCHHH
LYIAAMGNIDNSLVEAARVDGATEFQVFWKIKWPSLLPTTLYIAIITTINSFQCFALIQL
HHEEHHCCCCHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHH
LTSGGPNYSTSTLMYYLYEKAFQLTEYGYANTIGVFLAIMIAIVSFVQFKVLGNDVEY
HHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PTVKVNKIRMRETVISYAFLAPVLFFFVIFVLAPMIMGFITSFFNYSMTSFEFVGLDNY
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHH
IRMFKDPVFTKSLINTVILVIGSVPVVVLFSLFVASQTYHQNAIARSFYRFVFFLPVVTG
HHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SVAVTVVWKWIYDPLSGILNFVLKSSHIISQNISWLGDKNWALMAIMIILLTTSVGQPII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCCHHH
LYIAAMGNIDNSLVEAARVDGATEFQVFWKIKWPSLLPTTLYIAIITTINSFQCFALIQL
HHEEHHCCCCHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHH
LTSGGPNYSTSTLMYYLYEKAFQLTEYGYANTIGVFLAIMIAIVSFVQFKVLGNDVEY
HHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]