Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
---|---|
Accession | NC_011896 |
Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is pntB [H]
Identifier: 221230900
GI number: 221230900
Start: 3151333
End: 3152751
Strand: Reverse
Name: pntB [H]
Synonym: MLBr_02634
Alternate gene names: 221230900
Gene position: 3152751-3151333 (Counterclockwise)
Preceding gene: 221230901
Following gene: 221230899
Centisome position: 96.47
GC content: 58.91
Gene sequence:
>1419_bases ATGAACTACTTCGTGATCGGCCTCTACATTCTTGCGTTCGCATTGTTCATCACCGGCTTGATGGGCCTGACCGGGCCCAG GACCGCGGTGTCCGGCAACTTGATCGCTGCGGTCGGTATGACCATTGCCGTGGCGGCGACGCTGGTCAAGATTCGGCACA CCGAGCAGTGGGTATTGATCATTGCCGCCCTGGTGGTGGGCATCGTCCTTGGCTTCCCTCCGGCACGGCTGACTAAGGTG ACTGCGATGCCCCAGCTGGTGGCGTTCTTCAACGGCGTTGGCGGTGGAACGGTCGCGCTTATTGCACTGTCGGAGTTCAT CGAGACTAGCGGCTTTTCGGAATTTCAGCATCACGAGTCGCCAACTGTGCATATCGTGGTGGCCTCGCTGTTCGCCGCGA TCATAGGGTCGATCTCGTTCTGGGGATCGATCATTGCGTTCGGTAAGTTGCAGGAGACAATCTCCGGATTCCCAATCGGT TTTGGCAAAGTCCAGCAGCCTATCAATTTGCTACTGTTGGTCGGCGCCATAGTCGCCGCAGTGGTCATCGGTCTGCACGC GCAGCCCGGATCCGCTGGGGCCTCGTTGTGGTGGATGATCGGGTTGCTGGTCGCCGCTGGCGTATTAGGCCTGATGGTGG TGCTGTCAATCGGCGGCGCCGACATGCCGGTGGTCATCTCCTTACTCAACGCTATGACTGGGCTCTCAGCTGCTGCGACG GGCCTGGCGCTGAACAATACCGCAATCATCGTGGCCGGCATGATCGTCGGCGCGTCCGGCTCGATCCTGACCAATCTCAT GGCCAAGGCGATGAACCGCTCCATACCCGCGATCGTCGCAGGAGGTTTCGGTAGCGGTGGCGTGGCACCCAGCCGTGACG GTGACAAGCAAGTCAAATCCACCTCGGCAGCCGATGCGGCGATCCAGATGGCTTACGCCAACCAGGTGATCGTGGTGCCG GGCTACGGGCTGGCGGTCGCGCAGGCCCAGCACGTTGTCAAAGACATGGCGTCCTTGCTGGAGAACAAAGGTGTGCCGGT GAGTTACGCGATTCACCCGGTTGCTGGCCGGATGCCCGGACACATGAATGTGTTGCTGGCTGAAGCAGAGGTCGACTACG ACGCCATGAAGGACATGGACGACATCAACGATGAGTTCGCTCGTACCGATGTTGTGATTGTCATCGGCGCCAACGACGTC ACCAACCCGGCGGCCCGTAACGAGACAGCCAGCCCGATCTATGGGATGCCGATCCTGAATGTTGATAAAGCGAAGTCGGT TATAGTGCTTAAGAGGTCGATGAACTCCGGATTTGCGGGCATTGACAACCGGCTATTCTACGCCGACGGTACCACCATGT TGTTCGGTGATGCCAAACAGTCGGTGACTGAGGTCACTGAGGAACTGAAGGTGCTATAG
Upstream 100 bases:
>100_bases TCGGGGGTTTTATCGTCACCGACCGGATGCTGGGTATGTTCAGGGGTAAGAAGAAGGCCTCGGCCGTCAAAACCGAAAAA GCAGCAGAATCGGTGGCCAA
Downstream 100 bases:
>100_bases CCTTAGGTCGAAACTAAGCCGAGTTGAAGTGCTGCGGCGCCCTAGACGGGAGGAAGATATCCGTTGCCATCGGTAACCCC GCGGAAGCTCCATGTTAGGT
Product: pyridine transhydrogenase subunit beta
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit beta; Proton-translocating transhydrogenase NADP(H)-binding component; Pyridine nucleotide transhydrogenase subunit beta; dIII [H]
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MNYFVIGLYILAFALFITGLMGLTGPRTAVSGNLIAAVGMTIAVAATLVKIRHTEQWVLIIAALVVGIVLGFPPARLTKV TAMPQLVAFFNGVGGGTVALIALSEFIETSGFSEFQHHESPTVHIVVASLFAAIIGSISFWGSIIAFGKLQETISGFPIG FGKVQQPINLLLLVGAIVAAVVIGLHAQPGSAGASLWWMIGLLVAAGVLGLMVVLSIGGADMPVVISLLNAMTGLSAAAT GLALNNTAIIVAGMIVGASGSILTNLMAKAMNRSIPAIVAGGFGSGGVAPSRDGDKQVKSTSAADAAIQMAYANQVIVVP GYGLAVAQAQHVVKDMASLLENKGVPVSYAIHPVAGRMPGHMNVLLAEAEVDYDAMKDMDDINDEFARTDVVIVIGANDV TNPAARNETASPIYGMPILNVDKAKSVIVLKRSMNSGFAGIDNRLFYADGTTMLFGDAKQSVTEVTEELKVL
Sequences:
>Translated_472_residues MNYFVIGLYILAFALFITGLMGLTGPRTAVSGNLIAAVGMTIAVAATLVKIRHTEQWVLIIAALVVGIVLGFPPARLTKV TAMPQLVAFFNGVGGGTVALIALSEFIETSGFSEFQHHESPTVHIVVASLFAAIIGSISFWGSIIAFGKLQETISGFPIG FGKVQQPINLLLLVGAIVAAVVIGLHAQPGSAGASLWWMIGLLVAAGVLGLMVVLSIGGADMPVVISLLNAMTGLSAAAT GLALNNTAIIVAGMIVGASGSILTNLMAKAMNRSIPAIVAGGFGSGGVAPSRDGDKQVKSTSAADAAIQMAYANQVIVVP GYGLAVAQAQHVVKDMASLLENKGVPVSYAIHPVAGRMPGHMNVLLAEAEVDYDAMKDMDDINDEFARTDVVIVIGANDV TNPAARNETASPIYGMPILNVDKAKSVIVLKRSMNSGFAGIDNRLFYADGTTMLFGDAKQSVTEVTEELKVL >Mature_472_residues MNYFVIGLYILAFALFITGLMGLTGPRTAVSGNLIAAVGMTIAVAATLVKIRHTEQWVLIIAALVVGIVLGFPPARLTKV TAMPQLVAFFNGVGGGTVALIALSEFIETSGFSEFQHHESPTVHIVVASLFAAIIGSISFWGSIIAFGKLQETISGFPIG FGKVQQPINLLLLVGAIVAAVVIGLHAQPGSAGASLWWMIGLLVAAGVLGLMVVLSIGGADMPVVISLLNAMTGLSAAAT GLALNNTAIIVAGMIVGASGSILTNLMAKAMNRSIPAIVAGGFGSGGVAPSRDGDKQVKSTSAADAAIQMAYANQVIVVP GYGLAVAQAQHVVKDMASLLENKGVPVSYAIHPVAGRMPGHMNVLLAEAEVDYDAMKDMDDINDEFARTDVVIVIGANDV TNPAARNETASPIYGMPILNVDKAKSVIVLKRSMNSGFAGIDNRLFYADGTTMLFGDAKQSVTEVTEELKVL
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG1282
COG function: function code C; NAD/NADP transhydrogenase beta subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNT beta subunit family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=469, Percent_Identity=37.5266524520256, Blast_Score=278, Evalue=8e-75, Organism=Homo sapiens, GI122939153, Length=469, Percent_Identity=37.5266524520256, Blast_Score=278, Evalue=8e-75, Organism=Escherichia coli, GI1787886, Length=471, Percent_Identity=43.5244161358811, Blast_Score=342, Evalue=3e-95, Organism=Caenorhabditis elegans, GI17550456, Length=465, Percent_Identity=36.3440860215054, Blast_Score=282, Evalue=2e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012136 - InterPro: IPR004003 [H]
Pfam domain/function: PF02233 PNTB [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 48827; Mature: 48827
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYFVIGLYILAFALFITGLMGLTGPRTAVSGNLIAAVGMTIAVAATLVKIRHTEQWVLI CCEEEHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH IAALVVGIVLGFPPARLTKVTAMPQLVAFFNGVGGGTVALIALSEFIETSGFSEFQHHES HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCC PTVHIVVASLFAAIIGSISFWGSIIAFGKLQETISGFPIGFGKVQQPINLLLLVGAIVAA CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VVIGLHAQPGSAGASLWWMIGLLVAAGVLGLMVVLSIGGADMPVVISLLNAMTGLSAAAT HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHH GLALNNTAIIVAGMIVGASGSILTNLMAKAMNRSIPAIVAGGFGSGGVAPSRDGDKQVKS CEEECCCEEEEEEEHHCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHH TSAADAAIQMAYANQVIVVPGYGLAVAQAQHVVKDMASLLENKGVPVSYAIHPVAGRMPG HHHHHHHHEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC HMNVLLAEAEVDYDAMKDMDDINDEFARTDVVIVIGANDVTNPAARNETASPIYGMPILN CCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC VDKAKSVIVLKRSMNSGFAGIDNRLFYADGTTMLFGDAKQSVTEVTEELKVL CCCCCEEEEEEECCCCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHCCC >Mature Secondary Structure MNYFVIGLYILAFALFITGLMGLTGPRTAVSGNLIAAVGMTIAVAATLVKIRHTEQWVLI CCEEEHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH IAALVVGIVLGFPPARLTKVTAMPQLVAFFNGVGGGTVALIALSEFIETSGFSEFQHHES HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCC PTVHIVVASLFAAIIGSISFWGSIIAFGKLQETISGFPIGFGKVQQPINLLLLVGAIVAA CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VVIGLHAQPGSAGASLWWMIGLLVAAGVLGLMVVLSIGGADMPVVISLLNAMTGLSAAAT HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHH GLALNNTAIIVAGMIVGASGSILTNLMAKAMNRSIPAIVAGGFGSGGVAPSRDGDKQVKS CEEECCCEEEEEEEHHCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHH TSAADAAIQMAYANQVIVVPGYGLAVAQAQHVVKDMASLLENKGVPVSYAIHPVAGRMPG HHHHHHHHEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC HMNVLLAEAEVDYDAMKDMDDINDEFARTDVVIVIGANDVTNPAARNETASPIYGMPILN CCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC VDKAKSVIVLKRSMNSGFAGIDNRLFYADGTTMLFGDAKQSVTEVTEELKVL CCCCCEEEEEEECCCCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]