Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 221230858

GI number: 221230858

Start: 3063130

End: 3063756

Strand: Reverse

Name: uidR [C]

Synonym: MLBr_02568

Alternate gene names: 221230858

Gene position: 3063756-3063130 (Counterclockwise)

Preceding gene: 221230859

Following gene: 221230854

Centisome position: 93.75

GC content: 58.69

Gene sequence:

>627_bases
ATGGCAGGTGGTGCAAAGAGGATACCGCGTGCTGTTCGCGAGCAGCAAATGTTGGACGCCGCGGTGCAGATGTTCTCGGT
CAACGGTTACCACAAGACCTCGATGGACGCCATCGCCGCTGAGGCGCAGATTTCCAAGCCAATGCTGTATCTGTATTACG
GCTCCAAGGAAGACCTCTTCGGCGCCTGCCTAAACCGCGAGATGAGCCGATTCATCGCTATGGTGCGTGCTGATATCGAC
TTCACGCAGAGTCCGAAGGACTTGCTACGCAACACAATCGTGTCGTTCCTACGTTACATCGACGCGAATCGGGCGTCGTG
GATCGTGATGTACATCCAGGCGATGAGCTTGCCGGCGTTCGCTCAGACGGTGCGTGAAGCACGCGATCAGATCACCGAAT
TGGTGGCTGGGTTGATGCGGGTAGGCACTCGCAGCTCAAGACCGGACCATGAATACGAGATAATGGCCGGGGCGCTGGTG
GGCGCTGGTGAGGCAATGGCCACCCGGCTCACGACCGGTGACATCGCTGTCGATGAGGCCGCCGAGCTGATGATTAACCT
GTTCTGGCACGGCCTCAAGGGCGCACCCGCGGATCGAGATTTCGGCCCTAGCATTGTTGCTGGCTAG

Upstream 100 bases:

>100_bases
AAAAGGTCCCGGCCCGGGGTGCGGGCGCTAGCACAGTCTGCGTGGCAGCTGCGTCGGTGTTTACTCTGGAGTAAGAGCGT
CCACGCTAAAGGGGCATGCG

Downstream 100 bases:

>100_bases
CGTATGGCTAGCGTATTCGTGCCGTGGCTGAACTTTCCGTCTCTTCCGAAGTCCTCATCGCCAGCAGTCCAGTCCGCCTC
GCGCTGGGGTTGCTGATCGG

Product: putative TetR-family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator; TetR-Family Regulatory Protein; LOW QUALITY PROTEIN TetR-Family Regulatory Protein; Regulatory Protein; Transcriptional Regulator TetR Family Protein; TetR-Family Protein Regulatory Protein; Tetr Family Transcriptional Regulator; Transcriptional Regulator Tetr Family

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAGGAKRIPRAVREQQMLDAAVQMFSVNGYHKTSMDAIAAEAQISKPMLYLYYGSKEDLFGACLNREMSRFIAMVRADID
FTQSPKDLLRNTIVSFLRYIDANRASWIVMYIQAMSLPAFAQTVREARDQITELVAGLMRVGTRSSRPDHEYEIMAGALV
GAGEAMATRLTTGDIAVDEAAELMINLFWHGLKGAPADRDFGPSIVAG

Sequences:

>Translated_208_residues
MAGGAKRIPRAVREQQMLDAAVQMFSVNGYHKTSMDAIAAEAQISKPMLYLYYGSKEDLFGACLNREMSRFIAMVRADID
FTQSPKDLLRNTIVSFLRYIDANRASWIVMYIQAMSLPAFAQTVREARDQITELVAGLMRVGTRSSRPDHEYEIMAGALV
GAGEAMATRLTTGDIAVDEAAELMINLFWHGLKGAPADRDFGPSIVAG
>Mature_207_residues
AGGAKRIPRAVREQQMLDAAVQMFSVNGYHKTSMDAIAAEAQISKPMLYLYYGSKEDLFGACLNREMSRFIAMVRADIDF
TQSPKDLLRNTIVSFLRYIDANRASWIVMYIQAMSLPAFAQTVREARDQITELVAGLMRVGTRSSRPDHEYEIMAGALVG
AGEAMATRLTTGDIAVDEAAELMINLFWHGLKGAPADRDFGPSIVAG

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22918; Mature: 22787

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGAKRIPRAVREQQMLDAAVQMFSVNGYHKTSMDAIAAEAQISKPMLYLYYGSKEDLF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHH
GACLNREMSRFIAMVRADIDFTQSPKDLLRNTIVSFLRYIDANRASWIVMYIQAMSLPAF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH
AQTVREARDQITELVAGLMRVGTRSSRPDHEYEIMAGALVGAGEAMATRLTTGDIAVDEA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCHHHHHH
AELMINLFWHGLKGAPADRDFGPSIVAG
HHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGGAKRIPRAVREQQMLDAAVQMFSVNGYHKTSMDAIAAEAQISKPMLYLYYGSKEDLF
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHH
GACLNREMSRFIAMVRADIDFTQSPKDLLRNTIVSFLRYIDANRASWIVMYIQAMSLPAF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH
AQTVREARDQITELVAGLMRVGTRSSRPDHEYEIMAGALVGAGEAMATRLTTGDIAVDEA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCHHHHHH
AELMINLFWHGLKGAPADRDFGPSIVAG
HHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA