Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
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Accession | NC_011896 |
Length | 3,268,071 |
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The map label for this gene is grpE
Identifier: 221230826
GI number: 221230826
Start: 2970747
End: 2971436
Strand: Reverse
Name: grpE
Synonym: MLBr_02495
Alternate gene names: 221230826
Gene position: 2971436-2970747 (Counterclockwise)
Preceding gene: 221230827
Following gene: 221230825
Centisome position: 90.92
GC content: 60.43
Gene sequence:
>690_bases GTGACCGAAGGCAATCCACACGAACAGGTGACGGTCACCGACAAACGACGGATCGATCCCGATACTGGCGAAGTACGATC TATACCTCTCGGCGACACGCCGGGAGGTAGCGAGCCGGCTGGTATGACCGACCGAAGTGCCAACAGTACCGACACAATGG TCGACAAAGTTGCTGAGCTGACTAGCGATCTGCAGCGGGTGCAGGCCGATTTTGCCAACTACCGTAAGCGAGCGTTGCGC GACCAGCAGACGGCTTCGGATCGAGCCAAGGCCACTGTCATCAGCCAATTGTTGGGTGTGCTTGACGATTTCGATCGTGC CCGCGAGCACGGCGATCTGGACTCGGGTCCGCTGAAGTCGGTCGCCGACAAGCTAATGAGCGCATTGACCGGGCTCGGGC TGGTGGCGTTTGGCGTCGAGGGAGAAGACTTCGACCCGGTGCTGCACGAAGCCGTGCAGCATGAGGGCGATGGTGGGGAA GGCTCCAAGCCGGTGATCGGTGACGTCCTCCGGCACGGCTACAAATTGGGCGATCAAGTGCTGCGGCACGCCTTGGTCGG GGTGGTTGACACGATCGCAGGCGATGGTGCCGAAACGGTTGCCATAGTCGCACCTGTCGACAGCACAGCCAAAACCGAGC AAGGTGAACTGGGCGATAACGTGACACCGCACAAGGAGGACGGTGATTAG
Upstream 100 bases:
>100_bases CTGCGTCGAAGGTGGGCGGCGAGGCTTCCGCGCCTGGTGGCTCGAACTCTACTGACGATGTGGTTGACGCGGAGGTGGTC GACGACGAACGGGAGTCCAA
Downstream 100 bases:
>100_bases GGGGTGACGCGATATGGCCCAGCGTGAATGGGTCGAAAAGGACTTCTACAAGGAGCTAGGCGTTTCCTCTGACGCCAGTC CCGAAGAGATTAAGCGTGCC
Product: heat shock protein GrpE
Products: NA
Alternate protein names: HSP-70 cofactor
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTEGNPHEQVTVTDKRRIDPDTGEVRSIPLGDTPGGSEPAGMTDRSANSTDTMVDKVAELTSDLQRVQADFANYRKRALR DQQTASDRAKATVISQLLGVLDDFDRAREHGDLDSGPLKSVADKLMSALTGLGLVAFGVEGEDFDPVLHEAVQHEGDGGE GSKPVIGDVLRHGYKLGDQVLRHALVGVVDTIAGDGAETVAIVAPVDSTAKTEQGELGDNVTPHKEDGD
Sequences:
>Translated_229_residues MTEGNPHEQVTVTDKRRIDPDTGEVRSIPLGDTPGGSEPAGMTDRSANSTDTMVDKVAELTSDLQRVQADFANYRKRALR DQQTASDRAKATVISQLLGVLDDFDRAREHGDLDSGPLKSVADKLMSALTGLGLVAFGVEGEDFDPVLHEAVQHEGDGGE GSKPVIGDVLRHGYKLGDQVLRHALVGVVDTIAGDGAETVAIVAPVDSTAKTEQGELGDNVTPHKEDGD >Mature_228_residues TEGNPHEQVTVTDKRRIDPDTGEVRSIPLGDTPGGSEPAGMTDRSANSTDTMVDKVAELTSDLQRVQADFANYRKRALRD QQTASDRAKATVISQLLGVLDDFDRAREHGDLDSGPLKSVADKLMSALTGLGLVAFGVEGEDFDPVLHEAVQHEGDGGEG SKPVIGDVLRHGYKLGDQVLRHALVGVVDTIAGDGAETVAIVAPVDSTAKTEQGELGDNVTPHKEDGD
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded
COG id: COG0576
COG function: function code O; Molecular chaperone GrpE (heat shock protein)
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the grpE family
Homologues:
None
Paralogues:
None
Copy number: 2359 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): GRPE_MYCLE (Q9CB23)
Other databases:
- EMBL: AL583925 - PIR: D87221 - RefSeq: NP_302612.1 - ProteinModelPortal: Q9CB23 - SMR: Q9CB23 - EnsemblBacteria: EBMYCT00000029071 - GeneID: 908465 - GenomeReviews: AL450380_GR - KEGG: mle:ML2495 - NMPDR: fig|272631.1.peg.1484 - Leproma: ML2495 - GeneTree: EBGT00050000017239 - HOGENOM: HBG732630 - OMA: IGRARDH - ProtClustDB: PRK14142 - BioCyc: MLEP272631:ML2495-MONOMER - GO: GO:0005739 - HAMAP: MF_01151 - InterPro: IPR000740 - InterPro: IPR013805 - InterPro: IPR009012 - Gene3D: G3DSA:3.90.20.20 - Gene3D: G3DSA:2.30.22.10 - PANTHER: PTHR21237 - PRINTS: PR00773
Pfam domain/function: PF01025 GrpE; SSF51064 GrpE_head
EC number: NA
Molecular weight: Translated: 24248; Mature: 24117
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS01071 GRPE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEGNPHEQVTVTDKRRIDPDTGEVRSIPLGDTPGGSEPAGMTDRSANSTDTMVDKVAEL CCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH TSDLQRVQADFANYRKRALRDQQTASDRAKATVISQLLGVLDDFDRAREHGDLDSGPLKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH VADKLMSALTGLGLVAFGVEGEDFDPVLHEAVQHEGDGGEGSKPVIGDVLRHGYKLGDQV HHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LRHALVGVVDTIAGDGAETVAIVAPVDSTAKTEQGELGDNVTPHKEDGD HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TEGNPHEQVTVTDKRRIDPDTGEVRSIPLGDTPGGSEPAGMTDRSANSTDTMVDKVAEL CCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH TSDLQRVQADFANYRKRALRDQQTASDRAKATVISQLLGVLDDFDRAREHGDLDSGPLKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH VADKLMSALTGLGLVAFGVEGEDFDPVLHEAVQHEGDGGEGSKPVIGDVLRHGYKLGDQV HHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LRHALVGVVDTIAGDGAETVAIVAPVDSTAKTEQGELGDNVTPHKEDGD HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002