Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
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Accession | NC_011896 |
Length | 3,268,071 |
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The map label for this gene is 221230767
Identifier: 221230767
GI number: 221230767
Start: 2870547
End: 2871404
Strand: Reverse
Name: 221230767
Synonym: MLBr_02400
Alternate gene names: NA
Gene position: 2871404-2870547 (Counterclockwise)
Preceding gene: 221230771
Following gene: 221230766
Centisome position: 87.86
GC content: 58.39
Gene sequence:
>858_bases GTGCGCGAGACAAGCAACCCGGTATTTCGTTCGTTGCCTAAGCAGAGGGGCGGGTACGCCCGGTTCGGTACTGATGCGGC CCCGATGCAGCAGGGGTACTATCAACCCGATCCATATGCCGCGACTCCCTACCAGGAGACTCGTGCTTATCAGGTTTCGC GGCCACTGACCATCGACGATGTCGTTACCAGGACCGGCATGACGCTGGCGGTGTTGGTGGTCTCGGCCATCGTCTCTTTC TTCCTGGTGGCATCGAATTTCGCACTAGCCACCCCGCTCACCTTGGCCGGCGTTTTTGGCGGCTTGGCGATGGTGCTGGT CGCTACCTTTGGGGGCAAACAGAACAGCCCGGCAATCGTGTTAAGTTACGCTGTACTCGAGGGGCTGTTCCTCGGCGCGG TTTCGTTCCTCTTCGCCAACTTTCAGGTATCGACAGTCAACGCTGGAGTGTTGATCGGGGAGGCCGTTCTAGGCACCTTC GGGGTGTTCTTTGGCATGCTCGTCGTCTACAAGACCGGAGCCATCCGGGTCACCCCGAAGTTCACCCGAATGCTGGTTGC GGGAACATTCGGTGTGCTAGCTTTGATGCTAGGCAATTTTGTGCTGGCGATGTTTGGTTTGGGTGGCGGAACAGGTCTAG GTTTGCGCAGCGGCGGACCGGTGGCTATCCTCTTCTCACTGGCGTGTATCGGCATCGCGGCATTTGGCTTTCTTCTTGAC TTCGATGCGGCTGACCAGATGATCCGCGCGGGGGCGCCGGAGAAGGCGGCGTGGGGTATTGCTCTGGGCTTGACCGTAAC GTTGGTCTGGCTATATGTCGAGATCCTGCGTCTGCTTAGTTATCTACAGAACGACTAG
Upstream 100 bases:
>100_bases AAAAAAACTGCAGCTCGATGGGGAACTCGGGTGGGCGATTGATCGTTGAGGCAACTGTTCGCATGGATCGAAGCCACAGC CACAAGAGAGGAGTCGACCG
Downstream 100 bases:
>100_bases CTCACCTCACCTATTAAGACACAAGAGCCGGCACGCCACCTGGTATGTCAGCTCTTGTGTCTTGTGTTGCGTTACCCCGC GGGCTGCTCTAACTGAGCAA
Product: putative transmembrane protein
Products: NA
Alternate protein names: Transmembrane Protein; Permease Of Facilitator Superfamily Protein; Membrane Spanning Protein
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MRETSNPVFRSLPKQRGGYARFGTDAAPMQQGYYQPDPYAATPYQETRAYQVSRPLTIDDVVTRTGMTLAVLVVSAIVSF FLVASNFALATPLTLAGVFGGLAMVLVATFGGKQNSPAIVLSYAVLEGLFLGAVSFLFANFQVSTVNAGVLIGEAVLGTF GVFFGMLVVYKTGAIRVTPKFTRMLVAGTFGVLALMLGNFVLAMFGLGGGTGLGLRSGGPVAILFSLACIGIAAFGFLLD FDAADQMIRAGAPEKAAWGIALGLTVTLVWLYVEILRLLSYLQND
Sequences:
>Translated_285_residues MRETSNPVFRSLPKQRGGYARFGTDAAPMQQGYYQPDPYAATPYQETRAYQVSRPLTIDDVVTRTGMTLAVLVVSAIVSF FLVASNFALATPLTLAGVFGGLAMVLVATFGGKQNSPAIVLSYAVLEGLFLGAVSFLFANFQVSTVNAGVLIGEAVLGTF GVFFGMLVVYKTGAIRVTPKFTRMLVAGTFGVLALMLGNFVLAMFGLGGGTGLGLRSGGPVAILFSLACIGIAAFGFLLD FDAADQMIRAGAPEKAAWGIALGLTVTLVWLYVEILRLLSYLQND >Mature_285_residues MRETSNPVFRSLPKQRGGYARFGTDAAPMQQGYYQPDPYAATPYQETRAYQVSRPLTIDDVVTRTGMTLAVLVVSAIVSF FLVASNFALATPLTLAGVFGGLAMVLVATFGGKQNSPAIVLSYAVLEGLFLGAVSFLFANFQVSTVNAGVLIGEAVLGTF GVFFGMLVVYKTGAIRVTPKFTRMLVAGTFGVLALMLGNFVLAMFGLGGGTGLGLRSGGPVAILFSLACIGIAAFGFLLD FDAADQMIRAGAPEKAAWGIALGLTVTLVWLYVEILRLLSYLQND
Specific function: Unknown
COG id: COG4760
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30101; Mature: 30101
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRETSNPVFRSLPKQRGGYARFGTDAAPMQQGYYQPDPYAATPYQETRAYQVSRPLTIDD CCCCCCHHHHHCHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHCEECCCCCCHHH VVTRTGMTLAVLVVSAIVSFFLVASNFALATPLTLAGVFGGLAMVLVATFGGKQNSPAIV HHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LSYAVLEGLFLGAVSFLFANFQVSTVNAGVLIGEAVLGTFGVFFGMLVVYKTGAIRVTPK HHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHH FTRMLVAGTFGVLALMLGNFVLAMFGLGGGTGLGLRSGGPVAILFSLACIGIAAFGFLLD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FDAADQMIRAGAPEKAAWGIALGLTVTLVWLYVEILRLLSYLQND HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRETSNPVFRSLPKQRGGYARFGTDAAPMQQGYYQPDPYAATPYQETRAYQVSRPLTIDD CCCCCCHHHHHCHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHCEECCCCCCHHH VVTRTGMTLAVLVVSAIVSFFLVASNFALATPLTLAGVFGGLAMVLVATFGGKQNSPAIV HHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LSYAVLEGLFLGAVSFLFANFQVSTVNAGVLIGEAVLGTFGVFFGMLVVYKTGAIRVTPK HHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHH FTRMLVAGTFGVLALMLGNFVLAMFGLGGGTGLGLRSGGPVAILFSLACIGIAAFGFLLD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FDAADQMIRAGAPEKAAWGIALGLTVTLVWLYVEILRLLSYLQND HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA