| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230186
Identifier: 221230186
GI number: 221230186
Start: 1622959
End: 1623912
Strand: Direct
Name: 221230186
Synonym: MLBr_01362
Alternate gene names: NA
Gene position: 1622959-1623912 (Clockwise)
Preceding gene: 221230185
Following gene: 221230187
Centisome position: 49.66
GC content: 60.48
Gene sequence:
>954_bases ATGATCTCGTTACGCCAACATGCGTTCTCCCTGGCTGCAGTCTTCTTGGCGTTGGCCGTGGGAGTTGTACTGGGTTCCGG ATTTTTGTCAGACACTTTGTTGTCCAGTCTGCGTGACGAGAAGCGGGACCTATACACGCAGATCAGTGGGCTCAACGACC AGAAGAACATGCTGAACGAGAAAGTCAGTGCAGCAAATAACTTCGATAACCAGCTACTAGGTCGGATCGTGCACGACGTG CTTGGGGGCACGTCGGTGGTGGTCTTCCGCACTCCGGATGCAAAAGATGACGATGTCGCGGCGGTGTCGAAAATCGTGGT CCAGGCCGGCGGGACGGTCACCGGAACGGTGTCGCTGACGCAGGAATTTGTCGATGCCAACTCCACGGAAAAGCTTCGCA GCGTCGTGAATTCGTCGATTCTGCCAGCCGGTGCACAGTTGAGCACCAAGCTCGTCGACCAAGGTTCGCAGGCTGGCGAC CTGCTGGGGATCACATTGCTGGTCAACGCTAACCCGGCCGTCCCCAATGTCGGAGATGCTCAGCGCAGTACCGTCCTAGT GGCACTGCGTGACACAGGTTTCATCACTTACCAGACCTACAATCGAAATGATCACCTGGGGGCGGCGAACGCCGCGCTAG TCATTACCGGCGGTTTACTACCCCAAGATGCCGGCAATCAAGGGGTCAGCGTGGCCCGGTTTTCCGCCGCACTCGCTCCG CATGGTTCTGGCACCCTGCTTGCTGGCCGGGACGGCTCGGCGACGGGAGTCGCCGCCGTGGCGGTAGCCCGCGCCGATGC TGGCATGGCCGCCACGATCAGCACCGTCGATAACGTCGATGCCGAACCTGGGCGGATCACCGCGATCCTGGGTCTGCACG ACTTGCTCAGTGGCGGCCATACCGGGCAGTACGGCGTCGGACACGGGGCTACCTCGATCACCGTGCCCCAGTAG
Upstream 100 bases:
>100_bases CACCGATGGTGTAGTGCTGCACGGGGTTATCGACTACTGGAACCGCTTTTCCCTTTGGATACAGCGCCTGATCGCCTAAT TTCCCGAGGTACGTGCACTC
Downstream 100 bases:
>100_bases GTTCGGACCCCAGTAGCTGCGATGTGATGTAGGGTGTGTTTTGCCGCGCCACAGCATGCTGGGTGTTAAGGTGGGTTTCC GTAAGTTGGCAGATCCAGCT
Product: putative conserved secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MISLRQHAFSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLYTQISGLNDQKNMLNEKVSAANNFDNQLLGRIVHDV LGGTSVVVFRTPDAKDDDVAAVSKIVVQAGGTVTGTVSLTQEFVDANSTEKLRSVVNSSILPAGAQLSTKLVDQGSQAGD LLGITLLVNANPAVPNVGDAQRSTVLVALRDTGFITYQTYNRNDHLGAANAALVITGGLLPQDAGNQGVSVARFSAALAP HGSGTLLAGRDGSATGVAAVAVARADAGMAATISTVDNVDAEPGRITAILGLHDLLSGGHTGQYGVGHGATSITVPQ
Sequences:
>Translated_317_residues MISLRQHAFSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLYTQISGLNDQKNMLNEKVSAANNFDNQLLGRIVHDV LGGTSVVVFRTPDAKDDDVAAVSKIVVQAGGTVTGTVSLTQEFVDANSTEKLRSVVNSSILPAGAQLSTKLVDQGSQAGD LLGITLLVNANPAVPNVGDAQRSTVLVALRDTGFITYQTYNRNDHLGAANAALVITGGLLPQDAGNQGVSVARFSAALAP HGSGTLLAGRDGSATGVAAVAVARADAGMAATISTVDNVDAEPGRITAILGLHDLLSGGHTGQYGVGHGATSITVPQ >Mature_317_residues MISLRQHAFSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLYTQISGLNDQKNMLNEKVSAANNFDNQLLGRIVHDV LGGTSVVVFRTPDAKDDDVAAVSKIVVQAGGTVTGTVSLTQEFVDANSTEKLRSVVNSSILPAGAQLSTKLVDQGSQAGD LLGITLLVNANPAVPNVGDAQRSTVLVALRDTGFITYQTYNRNDHLGAANAALVITGGLLPQDAGNQGVSVARFSAALAP HGSGTLLAGRDGSATGVAAVAVARADAGMAATISTVDNVDAEPGRITAILGLHDLLSGGHTGQYGVGHGATSITVPQ
Specific function: Likely involved in transport processes across the outer membrane. Appears to be specific for mycolic acid-containing membranes
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): OMP1_MYCLE (Q49894)
Other databases:
- EMBL: U00021 - EMBL: U00021 - EMBL: Z95117 - EMBL: AL583921 - PIR: D87079 - PIR: S72963 - PIR: S72964 - RefSeq: NP_301972.1 - EnsemblBacteria: EBMYCT00000029498 - GeneID: 910492 - GenomeReviews: AL450380_GR - KEGG: mle:ML1362 - NMPDR: fig|272631.1.peg.844 - Leproma: ML1362 - GeneTree: EBGT00050000017064 - HOGENOM: HBG580092 - OMA: SGLRDDK - ProtClustDB: CLSK791334 - BioCyc: MLEP272631:ML1362-MONOMER - InterPro: IPR021522
Pfam domain/function: PF11382 DUF3186
EC number: NA
Molecular weight: Translated: 32361; Mature: 32361
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLRQHAFSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLYTQISGLNDQKNMLNE CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KVSAANNFDNQLLGRIVHDVLGGTSVVVFRTPDAKDDDVAAVSKIVVQAGGTVTGTVSLT HHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEHHHH QEFVDANSTEKLRSVVNSSILPAGAQLSTKLVDQGSQAGDLLGITLLVNANPAVPNVGDA HHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCC QRSTVLVALRDTGFITYQTYNRNDHLGAANAALVITGGLLPQDAGNQGVSVARFSAALAP CCCEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCC HGSGTLLAGRDGSATGVAAVAVARADAGMAATISTVDNVDAEPGRITAILGLHDLLSGGH CCCCEEEECCCCCCCHHHHHEEHHCCCCCEEEEEHHHCCCCCCCEEEEEEEHHHHHCCCC TGQYGVGHGATSITVPQ CCCCCCCCCCCEEECCC >Mature Secondary Structure MISLRQHAFSLAAVFLALAVGVVLGSGFLSDTLLSSLRDEKRDLYTQISGLNDQKNMLNE CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KVSAANNFDNQLLGRIVHDVLGGTSVVVFRTPDAKDDDVAAVSKIVVQAGGTVTGTVSLT HHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEHHHH QEFVDANSTEKLRSVVNSSILPAGAQLSTKLVDQGSQAGDLLGITLLVNANPAVPNVGDA HHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCC QRSTVLVALRDTGFITYQTYNRNDHLGAANAALVITGGLLPQDAGNQGVSVARFSAALAP CCCEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCC HGSGTLLAGRDGSATGVAAVAVARADAGMAATISTVDNVDAEPGRITAILGLHDLLSGGH CCCCEEEECCCCCCCHHHHHEEHHCCCCCEEEEEHHHCCCCCCCEEEEEEEHHHHHCCCC TGQYGVGHGATSITVPQ CCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002