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The map label for this gene is clpS

Identifier: 221230064

GI number: 221230064

Start: 1364652

End: 1364978

Strand: Direct

Name: clpS

Synonym: MLBr_01165

Alternate gene names: 221230064

Gene position: 1364652-1364978 (Clockwise)

Preceding gene: 221230063

Following gene: 221230065

Centisome position: 41.76

GC content: 55.66

Gene sequence:

>327_bases
GTGTGGGTCATGGTTGTTACGTTAGCTCCGATAGAACCGAAGGTGAGGCCGAACACAACCTGGCAACACGAGTCAGCTCC
AGTAGACATCACGGCCGCTCGATGGGTCACGATTGTGTGGGATGACCCCGTCAACTTGATGGCGTACGTGACGTATGTGT
TTCAGAAATTGTTTGGCTACAGCGAGCCTCATGCCACCAAGCTGATGCTGCAGGTTCACAATGAAGGTAAGGCAGTGGTG
TCGATGGGTAGTCGGGAGTCCATGGAGGTCGATGTGTCCAAGCTGCATGCCGCCGGTTTGTGGGCGACGATGCAGCAGGA
CCGGTGA

Upstream 100 bases:

>100_bases
CTTGTCAACATAGTTAATTTGTACCTGTCGGTCAGCAGCTCGTCGAAGACCGAGTTGTTCATTCCGCAACGGTAACGGCT
GTCAGCGCAAGCTCGGTATC

Downstream 100 bases:

>100_bases
GGTCCGAAGGTATCCAGGATCGTTCGTGCGCAAATGGAAGCGCGTTGAGACTGCCAACGGCCCCCGTTTTCGGTCCGTCG
TGGCGCCGCACGAGGTTGCC

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MWVMVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVV
SMGSRESMEVDVSKLHAAGLWATMQQDR

Sequences:

>Translated_108_residues
MWVMVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVV
SMGSRESMEVDVSKLHAAGLWATMQQDR
>Mature_108_residues
MWVMVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVV
SMGSRESMEVDVSKLHAAGLWATMQQDR

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CLPS_MYCLE (P53423)

Other databases:

- EMBL:   U00014
- EMBL:   AL583921
- PIR:   G87054
- PIR:   S72796
- RefSeq:   NP_301850.1
- ProteinModelPortal:   P53423
- SMR:   P53423
- EnsemblBacteria:   EBMYCT00000028806
- GeneID:   910263
- GenomeReviews:   AL450380_GR
- KEGG:   mle:ML1165
- NMPDR:   fig|272631.1.peg.722
- Leproma:   ML1165
- GeneTree:   EBGT00050000017021
- HOGENOM:   HBG545468
- OMA:   GLWATLQ
- ProtClustDB:   PRK00033
- BioCyc:   MLEP272631:ML1165-MONOMER
- HAMAP:   MF_00302
- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719
- Gene3D:   G3DSA:3.30.1390.10

Pfam domain/function: PF02617 ClpS; SSF54736 Ribosomal_L7/12_C/ClpS-like

EC number: NA

Molecular weight: Translated: 12270; Mature: 12270

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVMVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGY
CEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECEEEEEEECCCHHHHHHHHHHHHHHHCC
SEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR
CCCCCEEEEEEECCCCCEEEEECCCCCEEEHHHHHHHHCCEEEECCCC
>Mature Secondary Structure
MWVMVVTLAPIEPKVRPNTTWQHESAPVDITAARWVTIVWDDPVNLMAYVTYVFQKLFGY
CEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECEEEEEEECCCHHHHHHHHHHHHHHHCC
SEPHATKLMLQVHNEGKAVVSMGSRESMEVDVSKLHAAGLWATMQQDR
CCCCCEEEEEEECCCCCEEEEECCCCCEEEHHHHHHHHCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002