Click here to switch to the map view.

The map label for this gene is ybbN [C]

Identifier: 221230063

GI number: 221230063

Start: 1354320

End: 1355225

Strand: Direct

Name: ybbN [C]

Synonym: MLBr_01159

Alternate gene names: 221230063

Gene position: 1354320-1355225 (Clockwise)

Preceding gene: 221230062

Following gene: 221230064

Centisome position: 41.44

GC content: 59.05

Gene sequence:

>906_bases
ATGGCCGGTGCGGTCGACCTTTCCGGTCTGAAGCAGCGAGCTCGGCAGAAAGCTTCAACAAGTGACCCCGCCAGTCGAGC
AACATTGGGAGCGCGTGGCACCGGTAGCTCCGAAAACACCTCGGTCATTGAGATCACCGAGGCCAATTTCGAAGATGAAG
TACTGGTCCGGTCCCACGAAGTACCGATCCTGGTGCTGGTATGGTCACCGCGCAGTGATGCGTGTGTAAAGCTGCTTGAA
ACACTATCCGGCTTGGCGGTCGCCGACAGCGGCACCTGGTTGTTGGCGACGGTCAACGTCGACGCGGTGCCCAGGGTGGC
GCAGATCTTTGGTGTTGATGCGGTTCCGACCGTGGTCGCGCTGGCTGCTGGGCAGCCGTTGTCCAGCTTTCAGGGCATGC
AGTCCGTCGATCAGTTACGCCGCTGGCTGGATTCGTTGCTATCGGTGACAGCCGGTAAACTGAGAGGCCCAACTCGTTCT
GAGGATTCTGCAGAAATTGATCCTGCGATTGCCCAAGCTCGCCAGCAATTGGAAGCCGGTGACTTCCTCACTGCGAAGCA
GTCATATCACGCGATTTTGGATGCCGATCCGGCCAGTGTCGAAGCTAAGGCCGCGATCCGGCAGATCGACTTCCTTACGC
GCGCAACTGCGCAACATCCCGACGCGGTTGCGGTAGCCGATGCTGCGCCGGGTGACATTGCGGCGGCGTTCGCGGCTGCT
GACGTGCAAATCCTCAACCAAGATGTGACCGCGGCGTTCGAGCGCCTGATTGTTTTGGTGCGCAGCACATCTGGAGATGA
GCGCAGTTCGGTACGTACTCGGCTGATCGAGCTGTTTGAACTCTTCGATCCCGACGATCCCAATGTCATCGTCGGTCGAC
GCAACCTTGCCAACGCATTGTACTGA

Upstream 100 bases:

>100_bases
GCGACTACGTAAGCATGGGCGCCAGTGAGTGTATCGGTACCCGATGCGACGTGACAGACTTGACAACGTGACGTCTCCGC
GATCCCCCATCAGGCCTGCC

Downstream 100 bases:

>100_bases
GTCCTTCTTGGCTCTTGCGCTACTAGGGTTTTGCGTTATTGAATTCTAACTACGATGCCGACATCAGCGGCAGCACCAAC
ACCGCCGATTCCGGGCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MAGAVDLSGLKQRARQKASTSDPASRATLGARGTGSSENTSVIEITEANFEDEVLVRSHEVPILVLVWSPRSDACVKLLE
TLSGLAVADSGTWLLATVNVDAVPRVAQIFGVDAVPTVVALAAGQPLSSFQGMQSVDQLRRWLDSLLSVTAGKLRGPTRS
EDSAEIDPAIAQARQQLEAGDFLTAKQSYHAILDADPASVEAKAAIRQIDFLTRATAQHPDAVAVADAAPGDIAAAFAAA
DVQILNQDVTAAFERLIVLVRSTSGDERSSVRTRLIELFELFDPDDPNVIVGRRNLANALY

Sequences:

>Translated_301_residues
MAGAVDLSGLKQRARQKASTSDPASRATLGARGTGSSENTSVIEITEANFEDEVLVRSHEVPILVLVWSPRSDACVKLLE
TLSGLAVADSGTWLLATVNVDAVPRVAQIFGVDAVPTVVALAAGQPLSSFQGMQSVDQLRRWLDSLLSVTAGKLRGPTRS
EDSAEIDPAIAQARQQLEAGDFLTAKQSYHAILDADPASVEAKAAIRQIDFLTRATAQHPDAVAVADAAPGDIAAAFAAA
DVQILNQDVTAAFERLIVLVRSTSGDERSSVRTRLIELFELFDPDDPNVIVGRRNLANALY
>Mature_300_residues
AGAVDLSGLKQRARQKASTSDPASRATLGARGTGSSENTSVIEITEANFEDEVLVRSHEVPILVLVWSPRSDACVKLLET
LSGLAVADSGTWLLATVNVDAVPRVAQIFGVDAVPTVVALAAGQPLSSFQGMQSVDQLRRWLDSLLSVTAGKLRGPTRSE
DSAEIDPAIAQARQQLEAGDFLTAKQSYHAILDADPASVEAKAAIRQIDFLTRATAQHPDAVAVADAAPGDIAAAFAAAD
VQILNQDVTAAFERLIVLVRSTSGDERSSVRTRLIELFELFDPDDPNVIVGRRNLANALY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=107, Percent_Identity=37.3831775700935, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31923; Mature: 31792

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGAVDLSGLKQRARQKASTSDPASRATLGARGTGSSENTSVIEITEANFEDEVLVRSHE
CCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECC
VPILVLVWSPRSDACVKLLETLSGLAVADSGTWLLATVNVDAVPRVAQIFGVDAVPTVVA
CCEEEEEECCCCHHHHHHHHHHCCCEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHH
LAAGQPLSSFQGMQSVDQLRRWLDSLLSVTAGKLRGPTRSEDSAEIDPAIAQARQQLEAG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
DFLTAKQSYHAILDADPASVEAKAAIRQIDFLTRATAQHPDAVAVADAAPGDIAAAFAAA
CCEEHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHH
DVQILNQDVTAAFERLIVLVRSTSGDERSSVRTRLIELFELFDPDDPNVIVGRRNLANAL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHC
Y
C
>Mature Secondary Structure 
AGAVDLSGLKQRARQKASTSDPASRATLGARGTGSSENTSVIEITEANFEDEVLVRSHE
CCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECC
VPILVLVWSPRSDACVKLLETLSGLAVADSGTWLLATVNVDAVPRVAQIFGVDAVPTVVA
CCEEEEEECCCCHHHHHHHHHHCCCEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHH
LAAGQPLSSFQGMQSVDQLRRWLDSLLSVTAGKLRGPTRSEDSAEIDPAIAQARQQLEAG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
DFLTAKQSYHAILDADPASVEAKAAIRQIDFLTRATAQHPDAVAVADAAPGDIAAAFAAA
CCEEHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHH
DVQILNQDVTAAFERLIVLVRSTSGDERSSVRTRLIELFELFDPDDPNVIVGRRNLANAL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]