Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
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Accession | NC_011896 |
Length | 3,268,071 |
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The map label for this gene is pimA
Identifier: 221229621
GI number: 221229621
Start: 552249
End: 553373
Strand: Reverse
Name: pimA
Synonym: MLBr_00452
Alternate gene names: 221229621
Gene position: 553373-552249 (Counterclockwise)
Preceding gene: 221229622
Following gene: 221229620
Centisome position: 16.93
GC content: 63.2
Gene sequence:
>1125_bases ATGCGGATCGGGATGATCTGTCCATACTCGTTCGATGTGCCAGGCGGGGTGCAATCGCACGTCTTGCAACTGGCCGAGGT GATGCGCGCGCGGGGACAGCAGGTCCGTGTGCTGGCGCCGGCTTCGCCGGATGTCTCGCTGCCCGAATATGTTGTCTCCG CCGGCAGGGCGATCCCGATTCCCTACAACGGTTCAGTGGCGCGGCTGCAGTTCAGTCCGGCAGTACACAGCAGAGTCAGG CGTTGGTTAGTGGACGGCGATTTTGACGTGCTTCACCTGCACGAACCGAACGCACCCAGCCTGTCGATGTGGGCGCTGCG GGTGGCCGAGGGGCCAATCGTCGCGACATTTCATACCTCCACCACCAAATCACTGACGCTGTCGGTATTCCAAGGCGTGC TGCGACCATGGCACGAGAAGATCATCGGCCGGATCGCAGTATCCGACTTAGCACGGCGCTGGCAAATGGAGGCTCTGGGG TCCGATGCGGTGGAGATCCCCAACGGGGTGAACGTTGATTCGTTGTCCTCGGCACCCCAGCTAGCCGGGTACCCGCGGCT CGGCAAGACGGTACTGTTCCTCGGCCGCTACGACGAGCCACGCAAAGGCATGTCGGTCCTGCTTGATGCCCTACCGGGAG TTATGGAATGCTTCGACGACGTACAGTTACTGATCGTCGGCCGTGGCGACGAAGAGCAATTGCGGAGCCAGGCAGGCGGA TTGGTGGAGCACATCCGTTTTCTTGGCCAGGTGGATGACGCCGGAAAAGCCGCGGCGATGCGCAGCGCCGACGTCTATTG CGCGCCCAACATCGGCGGCGAGAGTTTCGGCATTGTCCTGGTGGAGGCGATGGCCGCCGGCACTCCGGTGGTGGCGAGTG ATCTGGACGCGTTTCGCCGCGTACTGCGCGACGGCGAAGTCGGGCATTTAGTGCCTGCGGGCGATAGCGCCGCGTTGGCC GATGCGCTTGTCGCGTTGCTGCGCAACGACGTCCTGCGGGAGCGTTACGTGGCCGCCGGCGCCGAAGCGGTTCGTCGGTA TGACTGGTCGGTGGTGGCCAGCCAAATCATGCGGGTGTACGAAACGGTCGCTACGTCAGGTTCCAAGGTGCAGGTGGCTA GCTGA
Upstream 100 bases:
>100_bases CGCCGCCAACCCCACCGACTGGCACATGCTTCAGCCGCAATGGTTGGCTGACTTGTCCGATGCCAAGCGAGCGCAGCTGA GACCGAATTGAGGGAAGCCT
Downstream 100 bases:
>100_bases TGCTGACCCTCTTGGTGCTGTTAGTGGCGCTGGCCACGTTGGCGGGCGGCTGGGGATATCAAACGGCAAATCGGCTGAAC CGATTGCACGTCCGCTACGA
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MRIGMICPYSFDVPGGVQSHVLQLAEVMRARGQQVRVLAPASPDVSLPEYVVSAGRAIPIPYNGSVARLQFSPAVHSRVR RWLVDGDFDVLHLHEPNAPSLSMWALRVAEGPIVATFHTSTTKSLTLSVFQGVLRPWHEKIIGRIAVSDLARRWQMEALG SDAVEIPNGVNVDSLSSAPQLAGYPRLGKTVLFLGRYDEPRKGMSVLLDALPGVMECFDDVQLLIVGRGDEEQLRSQAGG LVEHIRFLGQVDDAGKAAAMRSADVYCAPNIGGESFGIVLVEAMAAGTPVVASDLDAFRRVLRDGEVGHLVPAGDSAALA DALVALLRNDVLRERYVAAGAEAVRRYDWSVVASQIMRVYETVATSGSKVQVAS
Sequences:
>Translated_374_residues MRIGMICPYSFDVPGGVQSHVLQLAEVMRARGQQVRVLAPASPDVSLPEYVVSAGRAIPIPYNGSVARLQFSPAVHSRVR RWLVDGDFDVLHLHEPNAPSLSMWALRVAEGPIVATFHTSTTKSLTLSVFQGVLRPWHEKIIGRIAVSDLARRWQMEALG SDAVEIPNGVNVDSLSSAPQLAGYPRLGKTVLFLGRYDEPRKGMSVLLDALPGVMECFDDVQLLIVGRGDEEQLRSQAGG LVEHIRFLGQVDDAGKAAAMRSADVYCAPNIGGESFGIVLVEAMAAGTPVVASDLDAFRRVLRDGEVGHLVPAGDSAALA DALVALLRNDVLRERYVAAGAEAVRRYDWSVVASQIMRVYETVATSGSKVQVAS >Mature_374_residues MRIGMICPYSFDVPGGVQSHVLQLAEVMRARGQQVRVLAPASPDVSLPEYVVSAGRAIPIPYNGSVARLQFSPAVHSRVR RWLVDGDFDVLHLHEPNAPSLSMWALRVAEGPIVATFHTSTTKSLTLSVFQGVLRPWHEKIIGRIAVSDLARRWQMEALG SDAVEIPNGVNVDSLSSAPQLAGYPRLGKTVLFLGRYDEPRKGMSVLLDALPGVMECFDDVQLLIVGRGDEEQLRSQAGG LVEHIRFLGQVDDAGKAAAMRSADVYCAPNIGGESFGIVLVEAMAAGTPVVASDLDAFRRVLRDGEVGHLVPAGDSAALA DALVALLRNDVLRERYVAAGAEAVRRYDWSVVASQIMRVYETVATSGSKVQVAS
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1)
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PIMA_MYCLE (O07147)
Other databases:
- EMBL: Z96801 - EMBL: AL583918 - PIR: D86965 - RefSeq: NP_301406.1 - ProteinModelPortal: O07147 - SMR: O07147 - EnsemblBacteria: EBMYCT00000029219 - GeneID: 909199 - GenomeReviews: AL450380_GR - KEGG: mle:ML0452 - NMPDR: fig|272631.1.peg.278 - Leproma: ML0452 - GeneTree: EBGT00050000015521 - HOGENOM: HBG726846 - OMA: VLHIHEP - ProtClustDB: CLSK872083 - BioCyc: MLEP272631:ML0452-MONOMER - BRENDA: 2.4.1.57 - InterPro: IPR001296
Pfam domain/function: PF00534 Glycos_transf_1
EC number: =2.4.1.57
Molecular weight: Translated: 40274; Mature: 40274
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: BINDING 9-9 BINDING 16-16 BINDING 196-196 BINDING 256-256 BINDING 282-282
Signals:
None
Transmembrane regions:
HASH(0x229fb43c)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGMICPYSFDVPGGVQSHVLQLAEVMRARGQQVRVLAPASPDVSLPEYVVSAGRAIPI CEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHCCCEEEC PYNGSVARLQFSPAVHSRVRRWLVDGDFDVLHLHEPNAPSLSMWALRVAEGPIVATFHTS CCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHEEEECCCCEEEEEECC TTKSLTLSVFQGVLRPWHEKIIGRIAVSDLARRWQMEALGSDAVEIPNGVNVDSLSSAPQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCC LAGYPRLGKTVLFLGRYDEPRKGMSVLLDALPGVMECFDDVQLLIVGRGDEEQLRSQAGG CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCH LVEHIRFLGQVDDAGKAAAMRSADVYCAPNIGGESFGIVLVEAMAAGTPVVASDLDAFRR HHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCCHHHHHEEHHHCCCCHHHHHHHHHHH VLRDGEVGHLVPAGDSAALADALVALLRNDVLRERYVAAGAEAVRRYDWSVVASQIMRVY HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETVATSGSKVQVAS HHHHCCCCEEEECH >Mature Secondary Structure MRIGMICPYSFDVPGGVQSHVLQLAEVMRARGQQVRVLAPASPDVSLPEYVVSAGRAIPI CEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHCCCEEEC PYNGSVARLQFSPAVHSRVRRWLVDGDFDVLHLHEPNAPSLSMWALRVAEGPIVATFHTS CCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHEEEECCCCEEEEEECC TTKSLTLSVFQGVLRPWHEKIIGRIAVSDLARRWQMEALGSDAVEIPNGVNVDSLSSAPQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCC LAGYPRLGKTVLFLGRYDEPRKGMSVLLDALPGVMECFDDVQLLIVGRGDEEQLRSQAGG CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCH LVEHIRFLGQVDDAGKAAAMRSADVYCAPNIGGESFGIVLVEAMAAGTPVVASDLDAFRR HHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCCHHHHHEEHHHCCCCHHHHHHHHHHH VLRDGEVGHLVPAGDSAALADALVALLRNDVLRERYVAAGAEAVRRYDWSVVASQIMRVY HHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETVATSGSKVQVAS HHHHCCCCEEEECH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002