Click here to switch to the map view.

The map label for this gene is cheD [H]

Identifier: 220933090

GI number: 220933090

Start: 2463090

End: 2463596

Strand: Reverse

Name: cheD [H]

Synonym: Hore_22580

Alternate gene names: 220933090

Gene position: 2463596-2463090 (Counterclockwise)

Preceding gene: 220933091

Following gene: 220933089

Centisome position: 95.56

GC content: 38.07

Gene sequence:

>507_bases
ATGGAGCATAAAAGATTGGGTAGAAGGGAAGTTAAAACTATTTTCGCCGGTGAATTTTACGTTACAACTAGTAGTGATGT
TATTATTTCTACTCTGCTGGGTTCCTGTGTTGCTGTCTGTTTAAGTGATGATTTTAATTCTGTATATGGTATGAATCATT
TTATGTTACCAACCAGAGTCCGTGAAAGTAATAATGTTTATTCTGGAAAATATGGTGAAGATGCAATGGAGTTACTAATT
ACGGAAATGGAGAAGAGGGGGGCGCGGATTAATTATATGACCGCTAAGGTGTTTGGTGGAGGACAGGTTGCAGGAACAAC
CCATAGTAATGTGGCCCGGGCAAACATTAGACTGGCAATACAATTTTTAAAAAAGAAAGGTATACCCATTATTGCCAGGG
ATGTTGGGGGGAAACATGGCAGGCAGATATATTTCTGGCCCCGTAAAAATGTCTTTTCACGAAAAATCAAAATGACTGAA
ATAAAGGATGTATCAGTTAATGAGTAA

Upstream 100 bases:

>100_bases
TTAGGACATTCTGAATCTATAAATAACAGTAGAGCAAAAAACAACCGATGGAAATTAGTCTGGCAGACAACCTATCAGAA
AACAGGCAAGGGTGAAAGAG

Downstream 100 bases:

>100_bases
AATCAGGGTTTTAGTAATTGATGATTCTCTTATGGTAAGAAAAATATTAACAAACACCCTGGAAAAGGATAATAACATTA
CTGTGGTTGGTACTGCCAGA

Product: chemotaxis protein CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MEHKRLGRREVKTIFAGEFYVTTSSDVIISTLLGSCVAVCLSDDFNSVYGMNHFMLPTRVRESNNVYSGKYGEDAMELLI
TEMEKRGARINYMTAKVFGGGQVAGTTHSNVARANIRLAIQFLKKKGIPIIARDVGGKHGRQIYFWPRKNVFSRKIKMTE
IKDVSVNE

Sequences:

>Translated_168_residues
MEHKRLGRREVKTIFAGEFYVTTSSDVIISTLLGSCVAVCLSDDFNSVYGMNHFMLPTRVRESNNVYSGKYGEDAMELLI
TEMEKRGARINYMTAKVFGGGQVAGTTHSNVARANIRLAIQFLKKKGIPIIARDVGGKHGRQIYFWPRKNVFSRKIKMTE
IKDVSVNE
>Mature_168_residues
MEHKRLGRREVKTIFAGEFYVTTSSDVIISTLLGSCVAVCLSDDFNSVYGMNHFMLPTRVRESNNVYSGKYGEDAMELLI
TEMEKRGARINYMTAKVFGGGQVAGTTHSNVARANIRLAIQFLKKKGIPIIARDVGGKHGRQIYFWPRKNVFSRKIKMTE
IKDVSVNE

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 18927; Mature: 18927

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHKRLGRREVKTIFAGEFYVTTSSDVIISTLLGSCVAVCLSDDFNSVYGMNHFMLPTRV
CCCCCCCHHHHHEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCEE
RESNNVYSGKYGEDAMELLITEMEKRGARINYMTAKVFGGGQVAGTTHSNVARANIRLAI
CCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEECCCCCCCHHHHHHHHH
QFLKKKGIPIIARDVGGKHGRQIYFWPRKNVFSRKIKMTEIKDVSVNE
HHHHHCCCEEEEECCCCCCCCEEEEECCCCHHHHEEEEEEECCCCCCC
>Mature Secondary Structure
MEHKRLGRREVKTIFAGEFYVTTSSDVIISTLLGSCVAVCLSDDFNSVYGMNHFMLPTRV
CCCCCCCHHHHHEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCEE
RESNNVYSGKYGEDAMELLITEMEKRGARINYMTAKVFGGGQVAGTTHSNVARANIRLAI
CCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEECCCCCCCHHHHHHHHH
QFLKKKGIPIIARDVGGKHGRQIYFWPRKNVFSRKIKMTEIKDVSVNE
HHHHHCCCEEEEECCCCCCCCEEEEECCCCHHHHEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743194; 11743193 [H]