Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220933075
Identifier: 220933075
GI number: 220933075
Start: 2444861
End: 2445568
Strand: Reverse
Name: 220933075
Synonym: Hore_22430
Alternate gene names: NA
Gene position: 2445568-2444861 (Counterclockwise)
Preceding gene: 220933076
Following gene: 220933073
Centisome position: 94.86
GC content: 40.11
Gene sequence:
>708_bases GTGAGGTACGGCTGCTGGACCTATTTTGAAGTAGATGGGCCTTATCCATCGGGAGATTTGAAAGCAGATGGTGGCTCTTT AAAGAAATACCTTCCCATTTTCCCTGAAGTAAGACAGGAAGAAGGGGGGAGGTTGTATCTGGGAATATCGGACAGGCTTC TTGAGCCCTATCTTGATGGCAAAAAAGAGACTTCGATAGCCTTTGGTAAGCCCCTTTTAGTTAATTCTTATTCAGATTAT GGAAATGGCAGGGAAAAGATGGTTTTACAGGTGGAGGAAGGGTTACAAATAATACCTTTCTATGAACCTTTAAATGATTT TCTATTAAAAGGCAAGTTAAAAATAGATGGTGCCAGGGGTGGTTTTGCCTTCCACCTCAGTGAAGATAGCAGTGGTTATT TTGTGGAAATAATACCAGATACAGATACGGTCAGGCTTATTAAGCATTTACCACATATAAGAACCGATGGACACCGGTGG TTTGAATATAAAATAATCCAGGAAAATAATCTATCCCATTTTAATTTAAACTGGGAGACAAAAATCCCCTTTAAACTTGT GGTCAATAAAGGAGAAATAATGTTCAGCTTAAATAATATCCTGGCCCTGCATACGGTCAGTATGACCAGGCAACAGGGTA AACCCGGCCTTTTTGGAGAAAGTAGTAAGGTTGAATTGAGTGAGGGGTGTTTACTCAGTTTGAGTTAG
Upstream 100 bases:
>100_bases GTCGGAAAGACTGGAAGGCCCCTACCGGGCATTAGGTGATAACCGGCTTTTTGTTCCTCATAGCCATTATGCTGGAAAGG TTGTTTCCTTCAGGGGGAAG
Downstream 100 bases:
>100_bases AAAATAACATTTATTGTTAAACTGAATCTATATATACTTGGTCAGACCTATCATTTCATTATCATTAAGGTATTTAACAT TCTTCGTTAAAAGACTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRYGCWTYFEVDGPYPSGDLKADGGSLKKYLPIFPEVRQEEGGRLYLGISDRLLEPYLDGKKETSIAFGKPLLVNSYSDY GNGREKMVLQVEEGLQIIPFYEPLNDFLLKGKLKIDGARGGFAFHLSEDSSGYFVEIIPDTDTVRLIKHLPHIRTDGHRW FEYKIIQENNLSHFNLNWETKIPFKLVVNKGEIMFSLNNILALHTVSMTRQQGKPGLFGESSKVELSEGCLLSLS
Sequences:
>Translated_235_residues MRYGCWTYFEVDGPYPSGDLKADGGSLKKYLPIFPEVRQEEGGRLYLGISDRLLEPYLDGKKETSIAFGKPLLVNSYSDY GNGREKMVLQVEEGLQIIPFYEPLNDFLLKGKLKIDGARGGFAFHLSEDSSGYFVEIIPDTDTVRLIKHLPHIRTDGHRW FEYKIIQENNLSHFNLNWETKIPFKLVVNKGEIMFSLNNILALHTVSMTRQQGKPGLFGESSKVELSEGCLLSLS >Mature_235_residues MRYGCWTYFEVDGPYPSGDLKADGGSLKKYLPIFPEVRQEEGGRLYLGISDRLLEPYLDGKKETSIAFGKPLLVNSYSDY GNGREKMVLQVEEGLQIIPFYEPLNDFLLKGKLKIDGARGGFAFHLSEDSSGYFVEIIPDTDTVRLIKHLPHIRTDGHRW FEYKIIQENNLSHFNLNWETKIPFKLVVNKGEIMFSLNNILALHTVSMTRQQGKPGLFGESSKVELSEGCLLSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26686; Mature: 26686
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYGCWTYFEVDGPYPSGDLKADGGSLKKYLPIFPEVRQEEGGRLYLGISDRLLEPYLDG CCCEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCEEEEECCHHHHHHHHCC KKETSIAFGKPLLVNSYSDYGNGREKMVLQVEEGLQIIPFYEPLNDFLLKGKLKIDGARG CCCCEEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCHHEEEEEEEEECCCC GFAFHLSEDSSGYFVEIIPDTDTVRLIKHLPHIRTDGHRWFEYKIIQENNLSHFNLNWET CEEEEECCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEEECC KIPFKLVVNKGEIMFSLNNILALHTVSMTRQQGKPGLFGESSKVELSEGCLLSLS CCCEEEEEECCEEEEEECCEEEEEEEEHHHHCCCCCCCCCCCCEEECCCEEEEEC >Mature Secondary Structure MRYGCWTYFEVDGPYPSGDLKADGGSLKKYLPIFPEVRQEEGGRLYLGISDRLLEPYLDG CCCEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCEEEEECCHHHHHHHHCC KKETSIAFGKPLLVNSYSDYGNGREKMVLQVEEGLQIIPFYEPLNDFLLKGKLKIDGARG CCCCEEEECCCEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCHHEEEEEEEEECCCC GFAFHLSEDSSGYFVEIIPDTDTVRLIKHLPHIRTDGHRWFEYKIIQENNLSHFNLNWET CEEEEECCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEEECC KIPFKLVVNKGEIMFSLNNILALHTVSMTRQQGKPGLFGESSKVELSEGCLLSLS CCCEEEEEECCEEEEEECCEEEEEEEEHHHHCCCCCCCCCCCCEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA