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The map label for this gene is 220933072

Identifier: 220933072

GI number: 220933072

Start: 2440461

End: 2441492

Strand: Reverse

Name: 220933072

Synonym: Hore_22400

Alternate gene names: NA

Gene position: 2441492-2440461 (Counterclockwise)

Preceding gene: 220933073

Following gene: 220933071

Centisome position: 94.7

GC content: 40.89

Gene sequence:

>1032_bases
ATGAAGGTCAGGTATGATACGGAGAGTATTGGAGAACAAAAAATAGATACAGCCCTGGTGTTAAGTGGGGGTGGTGCCAA
GGGTGCCTATCAGGTCGGGGTTATAGAAGAACTGTTAAGGCGGGGAATCAGGATCGATCTGGTTACCGGGTCATCTATCG
GGGCTTTTAACGGGGCTCTACTGGCTGAATTTTTACAGTATGGCCAGTACAGGTCTGAAGATCCGGTTGAGAGGATAAAA
GAGGTCTGGTTAAACCTGGAAAAGGTTTTGACCCTGAACTGGCCCGGTTTTTTAAAAAACATCTTTACTCCATGGAGAAT
TCCCTCAGTATTTACCAATTTAGTTTTAAGAAAGGTTATATCAGATTATATTCCGGAGACGAGAATGATATCAGATTATA
AGATCTGTCAGCTGAGTATAACCGGGACAGACCTCAATAAAGGAATTACCAGGGTATTTGATTATAATTCCCGGATTGAG
GTAATTAAGGGGATTTTAGCCTCCATGGCCTATCCAGCAGCTTTCCCCAGTGTTAAAATTGGTAATAATTATTACATGGA
TGGGGGTGCCCTGGATAACACCCCTTTGAAAGAAGCCATTCTCTGGGGGGCCAGAAATATATATGTAGTTTTACTGGTAC
CCTTAAAGGAGATTAAAGAAGGAGAAGACCAGCTTCCGGGTAAGAACTACAGTGCCGCCCTGTCAGTATTAGACAGGTTT
ATTGATATAGCTTCAAGTAAATTAATGTATGGTGATTTACAACGGGCAGAAGAAATAAACAGAGTATTGAATTTACTGGA
TGAATACCGTGGCAAGATTAAGCCCTCTTTTATTTGGAAGCTTAAAAAAATACTGGATATAAAACAGCGTGGTAAAAAAG
ATGCTAAAAGAAGAATTAATATCTATAAAATAGCCCCTGAATCCACCCTTAAACCCCCCGGGGCTGCCGGATTTGATAAC
ATTAAGGCTATTTTGCGGTTATTTAAAAAGGGTAAGGAAGATACCCGTAGCTTGCTGGGGAAAAATATGTAA

Upstream 100 bases:

>100_bases
ATGGAAATCAATTATGAAAGGTCAGGAATAAGATTGGTTGTTTAATTATATTATAAAAATTCCTGAAGGGTTTAAATAAT
TTACAACCGGGGGGGAGACC

Downstream 100 bases:

>100_bases
ATTTACATTAGTTTATTGTTATATATTTGTAAAAGATAATAGTTTTCATTACTTATTATTGCATAACGTATTATTTTGTA
ATATAATTAAGTAAAATATA

Product: Patatin

Products: NA

Alternate protein names: Patatin-Like Phospholipase; Serine Protease; Alpha-Beta Hydrolase Superfamily Esterase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Phospholipase; PatatiN-Like Phospholipase; Alpha/Beta Hydrolase; Patatin Family Protein; Phospholipase Domain-Containing Protein; Transmembrane Protein; Lipid Acyl Hydrolase; Esterase

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKVRYDTESIGEQKIDTALVLSGGGAKGAYQVGVIEELLRRGIRIDLVTGSSIGAFNGALLAEFLQYGQYRSEDPVERIK
EVWLNLEKVLTLNWPGFLKNIFTPWRIPSVFTNLVLRKVISDYIPETRMISDYKICQLSITGTDLNKGITRVFDYNSRIE
VIKGILASMAYPAAFPSVKIGNNYYMDGGALDNTPLKEAILWGARNIYVVLLVPLKEIKEGEDQLPGKNYSAALSVLDRF
IDIASSKLMYGDLQRAEEINRVLNLLDEYRGKIKPSFIWKLKKILDIKQRGKKDAKRRINIYKIAPESTLKPPGAAGFDN
IKAILRLFKKGKEDTRSLLGKNM

Sequences:

>Translated_343_residues
MKVRYDTESIGEQKIDTALVLSGGGAKGAYQVGVIEELLRRGIRIDLVTGSSIGAFNGALLAEFLQYGQYRSEDPVERIK
EVWLNLEKVLTLNWPGFLKNIFTPWRIPSVFTNLVLRKVISDYIPETRMISDYKICQLSITGTDLNKGITRVFDYNSRIE
VIKGILASMAYPAAFPSVKIGNNYYMDGGALDNTPLKEAILWGARNIYVVLLVPLKEIKEGEDQLPGKNYSAALSVLDRF
IDIASSKLMYGDLQRAEEINRVLNLLDEYRGKIKPSFIWKLKKILDIKQRGKKDAKRRINIYKIAPESTLKPPGAAGFDN
IKAILRLFKKGKEDTRSLLGKNM
>Mature_343_residues
MKVRYDTESIGEQKIDTALVLSGGGAKGAYQVGVIEELLRRGIRIDLVTGSSIGAFNGALLAEFLQYGQYRSEDPVERIK
EVWLNLEKVLTLNWPGFLKNIFTPWRIPSVFTNLVLRKVISDYIPETRMISDYKICQLSITGTDLNKGITRVFDYNSRIE
VIKGILASMAYPAAFPSVKIGNNYYMDGGALDNTPLKEAILWGARNIYVVLLVPLKEIKEGEDQLPGKNYSAALSVLDRF
IDIASSKLMYGDLQRAEEINRVLNLLDEYRGKIKPSFIWKLKKILDIKQRGKKDAKRRINIYKIAPESTLKPPGAAGFDN
IKAILRLFKKGKEDTRSLLGKNM

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148727335, Length=219, Percent_Identity=32.4200913242009, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI148727290, Length=219, Percent_Identity=32.4200913242009, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI260656043, Length=198, Percent_Identity=29.2929292929293, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI260656037, Length=198, Percent_Identity=29.2929292929293, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI260656041, Length=198, Percent_Identity=29.2929292929293, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI116256487, Length=198, Percent_Identity=29.2929292929293, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI260656039, Length=198, Percent_Identity=29.2929292929293, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6323581, Length=214, Percent_Identity=28.0373831775701, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38656; Mature: 38656

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRYDTESIGEQKIDTALVLSGGGAKGAYQVGVIEELLRRGIRIDLVTGSSIGAFNGAL
CCEECCHHHHCHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
LAEFLQYGQYRSEDPVERIKEVWLNLEKVLTLNWPGFLKNIFTPWRIPSVFTNLVLRKVI
HHHHHHHCCCCCCCHHHHHHHHHHCHHHHEEECCCHHHHHHCCCCCHHHHHHHHHHHHHH
SDYIPETRMISDYKICQLSITGTDLNKGITRVFDYNSRIEVIKGILASMAYPAAFPSVKI
HHHCCCCCEECCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEE
GNNYYMDGGALDNTPLKEAILWGARNIYVVLLVPLKEIKEGEDQLPGKNYSAALSVLDRF
CCEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECHHHHCCCHHHCCCCCHHHHHHHHHHH
IDIASSKLMYGDLQRAEEINRVLNLLDEYRGKIKPSFIWKLKKILDIKQRGKKDAKRRIN
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHCEE
IYKIAPESTLKPPGAAGFDNIKAILRLFKKGKEDTRSLLGKNM
EEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure
MKVRYDTESIGEQKIDTALVLSGGGAKGAYQVGVIEELLRRGIRIDLVTGSSIGAFNGAL
CCEECCHHHHCHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHH
LAEFLQYGQYRSEDPVERIKEVWLNLEKVLTLNWPGFLKNIFTPWRIPSVFTNLVLRKVI
HHHHHHHCCCCCCCHHHHHHHHHHCHHHHEEECCCHHHHHHCCCCCHHHHHHHHHHHHHH
SDYIPETRMISDYKICQLSITGTDLNKGITRVFDYNSRIEVIKGILASMAYPAAFPSVKI
HHHCCCCCEECCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEE
GNNYYMDGGALDNTPLKEAILWGARNIYVVLLVPLKEIKEGEDQLPGKNYSAALSVLDRF
CCEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECHHHHCCCHHHCCCCCHHHHHHHHHHH
IDIASSKLMYGDLQRAEEINRVLNLLDEYRGKIKPSFIWKLKKILDIKQRGKKDAKRRIN
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHCEE
IYKIAPESTLKPPGAAGFDNIKAILRLFKKGKEDTRSLLGKNM
EEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA