Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220933070
Identifier: 220933070
GI number: 220933070
Start: 2436976
End: 2437647
Strand: Reverse
Name: 220933070
Synonym: Hore_22380
Alternate gene names: NA
Gene position: 2437647-2436976 (Counterclockwise)
Preceding gene: 220933071
Following gene: 220933069
Centisome position: 94.55
GC content: 41.82
Gene sequence:
>672_bases ATGAATGATGATATTAAGGTAAAGATATTAAAAGATGCAGTCATAGTTGCCGGCCACCCGAGAAGTGGGACTTCCCTGGC CTGTCAGCTGGTTGAGAGTGCCGGGGTTAAGTTTCCATCTGATTTTGCCGGTGATGATTATAATAAAGGCGGATATTATG AACTGGCTTTGAGTAAGGATTTATCAAAACGTTTAATAAAAAAGGCTATGACTGTAGAAAATACCATTGATATGAATAAA ATAATAGAGAGGTTAAATTCCTGCAGGGGGACAGCCGGTCTTAAAATTGTAAGAATACCGGCCATCTTCTTTTACCGTCA TGTCGCCAGAAATTTGAAAGCTGTCTTTGTTTACCGGAATCCGGCTGATGTTAAAGCCAGCCTTTTTAGAAGGGGTATTT CTGGATTTAGCCCCGGCTGGCTTGAGAATAATAATGCCCTGATTGCTGCCTATGAAAATATAGAAAACAGTATAGTAGTT AGCTATGAATCTCTTCTTTCCGGAAAAGAATGGGTTAAACAGGGTTTTCAGAAGCTGGGACTTGATGTAGATCTTGACCT GGTGAAAAAAGAAGAGAGGACCCAGCAGAGGAGTCGAGTCCTGGTGACCGCCGAAGAGGAAAAAATGTATCAAATCCTTC AGGAACTGGAAAGGGAGAGCTGTAGGGTCTGA
Upstream 100 bases:
>100_bases AGTCTAATTTTATTTGCATAGATGTGAAACTTAAAGTATATTTTGGTATATAACCAGGGGATAATCTGGTAAAAATTACG TAATACAGGAGGAGAAGAAT
Downstream 100 bases:
>100_bases TAATTTTGGTGGATTTAAGGCCGGGTAACCCGGCCTTTTTAAGATATTCAATCAGAAAAAGTGGGTTTAAATGGGTGACC ATCCAGATCAGCAAGATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MNDDIKVKILKDAVIVAGHPRSGTSLACQLVESAGVKFPSDFAGDDYNKGGYYELALSKDLSKRLIKKAMTVENTIDMNK IIERLNSCRGTAGLKIVRIPAIFFYRHVARNLKAVFVYRNPADVKASLFRRGISGFSPGWLENNNALIAAYENIENSIVV SYESLLSGKEWVKQGFQKLGLDVDLDLVKKEERTQQRSRVLVTAEEEKMYQILQELERESCRV
Sequences:
>Translated_223_residues MNDDIKVKILKDAVIVAGHPRSGTSLACQLVESAGVKFPSDFAGDDYNKGGYYELALSKDLSKRLIKKAMTVENTIDMNK IIERLNSCRGTAGLKIVRIPAIFFYRHVARNLKAVFVYRNPADVKASLFRRGISGFSPGWLENNNALIAAYENIENSIVV SYESLLSGKEWVKQGFQKLGLDVDLDLVKKEERTQQRSRVLVTAEEEKMYQILQELERESCRV >Mature_223_residues MNDDIKVKILKDAVIVAGHPRSGTSLACQLVESAGVKFPSDFAGDDYNKGGYYELALSKDLSKRLIKKAMTVENTIDMNK IIERLNSCRGTAGLKIVRIPAIFFYRHVARNLKAVFVYRNPADVKASLFRRGISGFSPGWLENNNALIAAYENIENSIVV SYESLLSGKEWVKQGFQKLGLDVDLDLVKKEERTQQRSRVLVTAEEEKMYQILQELERESCRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25165; Mature: 25165
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDDIKVKILKDAVIVAGHPRSGTSLACQLVESAGVKFPSDFAGDDYNKGGYYELALSKD CCCCEEEEEEECEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHH LSKRLIKKAMTVENTIDMNKIIERLNSCRGTAGLKIVRIPAIFFYRHVARNLKAVFVYRN HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEEEC PADVKASLFRRGISGFSPGWLENNNALIAAYENIENSIVVSYESLLSGKEWVKQGFQKLG CHHHHHHHHHHCCCCCCCCCEECCCEEEEEECCCCCCEEEEHHHHHCCHHHHHHHHHHHC LDVDLDLVKKEERTQQRSRVLVTAEEEKMYQILQELERESCRV CCCCHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNDDIKVKILKDAVIVAGHPRSGTSLACQLVESAGVKFPSDFAGDDYNKGGYYELALSKD CCCCEEEEEEECEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHH LSKRLIKKAMTVENTIDMNKIIERLNSCRGTAGLKIVRIPAIFFYRHVARNLKAVFVYRN HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEEEC PADVKASLFRRGISGFSPGWLENNNALIAAYENIENSIVVSYESLLSGKEWVKQGFQKLG CHHHHHHHHHHCCCCCCCCCEECCCEEEEEECCCCCCEEEEHHHHHCCHHHHHHHHHHHC LDVDLDLVKKEERTQQRSRVLVTAEEEKMYQILQELERESCRV CCCCHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA