Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220932974
Identifier: 220932974
GI number: 220932974
Start: 2332265
End: 2332681
Strand: Direct
Name: 220932974
Synonym: Hore_21420
Alternate gene names: NA
Gene position: 2332265-2332681 (Clockwise)
Preceding gene: 220932970
Following gene: 220932985
Centisome position: 90.46
GC content: 33.33
Gene sequence:
>417_bases ATGCCCTTTGGATATCCTAAAGAAATATTCAAATACCCTCCAATACAATATATCCCCCTAAATCTAAACCGCCTTGAGCA GGGAAACTCTCCTTTTAACAGTGAATCTATCAACTTTGAACTTTATACCTACCGGGAAAAACAACAATTATTAAATAAAC TAAGACTTTTAAACATAGATAAAGATTATGATTTTAATCAGGAAGAAATAGCGATACTTGTTTTCAATACAAGGGTTGAT TTAATTAAATACCGCGGTTATGAAGTTATCATGGTGGGAGAAATAATCAAAAACTACTTCCAGTTATTTACCATAACCAC CAGGTATTTTTATAAAGATAGAATTCTTTTCAACCTGTATAACGGTGATACTGCTGAAGTCCTGGACCGGGAAAGCTTTG AATACAACAACCTCTAG
Upstream 100 bases:
>100_bases TATGCATTTACACCCAAAATGTGAATAATGCAAGGACCCTAATTAATATATATATATTTAGAGTCGAATTTATGATAAAT TATTAAGGGAGGTTAATTAT
Downstream 100 bases:
>100_bases GCCTCCTTTTCTTCGACAATGTTAAACTGTATCTTTTCAAATACCTTGGCAAATACTTCTATTATTATTTTACAATTTAT TATCCCCTTTGATGGATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MPFGYPKEIFKYPPIQYIPLNLNRLEQGNSPFNSESINFELYTYREKQQLLNKLRLLNIDKDYDFNQEEIAILVFNTRVD LIKYRGYEVIMVGEIIKNYFQLFTITTRYFYKDRILFNLYNGDTAEVLDRESFEYNNL
Sequences:
>Translated_138_residues MPFGYPKEIFKYPPIQYIPLNLNRLEQGNSPFNSESINFELYTYREKQQLLNKLRLLNIDKDYDFNQEEIAILVFNTRVD LIKYRGYEVIMVGEIIKNYFQLFTITTRYFYKDRILFNLYNGDTAEVLDRESFEYNNL >Mature_137_residues PFGYPKEIFKYPPIQYIPLNLNRLEQGNSPFNSESINFELYTYREKQQLLNKLRLLNIDKDYDFNQEEIAILVFNTRVDL IKYRGYEVIMVGEIIKNYFQLFTITTRYFYKDRILFNLYNGDTAEVLDRESFEYNNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16759; Mature: 16628
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFGYPKEIFKYPPIQYIPLNLNRLEQGNSPFNSESINFELYTYREKQQLLNKLRLLNID CCCCCCHHHHCCCCEEEEECCHHHHCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHEECCC KDYDFNQEEIAILVFNTRVDLIKYRGYEVIMVGEIIKNYFQLFTITTRYFYKDRILFNLY CCCCCCCCEEEEEEEECCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHEEEECEEEEEEE NGDTAEVLDRESFEYNNL CCCHHHHHCCCCCCCCCC >Mature Secondary Structure PFGYPKEIFKYPPIQYIPLNLNRLEQGNSPFNSESINFELYTYREKQQLLNKLRLLNID CCCCCHHHHCCCCEEEEECCHHHHCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHEECCC KDYDFNQEEIAILVFNTRVDLIKYRGYEVIMVGEIIKNYFQLFTITTRYFYKDRILFNLY CCCCCCCCEEEEEEEECCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHEEEECEEEEEEE NGDTAEVLDRESFEYNNL CCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA