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The map label for this gene is ylqH [H]

Identifier: 220932827

GI number: 220932827

Start: 2150277

End: 2150564

Strand: Direct

Name: ylqH [H]

Synonym: Hore_19930

Alternate gene names: 220932827

Gene position: 2150277-2150564 (Clockwise)

Preceding gene: 220932826

Following gene: 220932835

Centisome position: 83.4

GC content: 35.42

Gene sequence:

>288_bases
ATGGATAAAAAAGTAGATAATAAAAAACAGGACAAAATAAAAAAGGCAGTAGCCTTAAGATATAATACCAGTAAGGATAA
TGCCCCCCGGATTGTAGCCTCCGGTAAAGGAACAATAGCAGAAAAAATAATGGAAACAGCCCGGAAACATGATATCCCTA
TAGAAAAAGACCAGGACATTGTTGATGCCCTGATCCGGCTCAATATCGGAACTGAAATTCCTCAAGAATTATATAAAGTA
ATTGCTGAAATATTAAGCTTCATTTATAAACTCGAAGGTCTCAAATGA

Upstream 100 bases:

>100_bases
ATCAAATTTTATAATAACAATTTATGAGCCCGGTTTTACAGCCAGAAGTATGGAAAACCCCGGATGATGAAAGATCCCTA
ATTGCAAAGGTGATTTTTAT

Downstream 100 bases:

>100_bases
AAGACCTTTATTAACTACCGGTCACTTCTTTAATTACCGTTAAAGCATAATCAATATCCTGACGATTAACATCCAGGTGA
GTAACCGCCCGGAGGGTATC

Product: FlhB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MDKKVDNKKQDKIKKAVALRYNTSKDNAPRIVASGKGTIAEKIMETARKHDIPIEKDQDIVDALIRLNIGTEIPQELYKV
IAEILSFIYKLEGLK

Sequences:

>Translated_95_residues
MDKKVDNKKQDKIKKAVALRYNTSKDNAPRIVASGKGTIAEKIMETARKHDIPIEKDQDIVDALIRLNIGTEIPQELYKV
IAEILSFIYKLEGLK
>Mature_95_residues
MDKKVDNKKQDKIKKAVALRYNTSKDNAPRIVASGKGTIAEKIMETARKHDIPIEKDQDIVDALIRLNIGTEIPQELYKV
IAEILSFIYKLEGLK

Specific function: Required For Formation Of The Rod Structure In The Basal Body Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG2257

COG function: function code S; Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane. [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788188, Length=78, Percent_Identity=35.8974358974359, Blast_Score=60, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004683
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 10780; Mature: 10780

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKVDNKKQDKIKKAVALRYNTSKDNAPRIVASGKGTIAEKIMETARKHDIPIEKDQDI
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHH
VDALIRLNIGTEIPQELYKVIAEILSFIYKLEGLK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDKKVDNKKQDKIKKAVALRYNTSKDNAPRIVASGKGTIAEKIMETARKHDIPIEKDQDI
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHH
VDALIRLNIGTEIPQELYKVIAEILSFIYKLEGLK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]