Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is gltX1 [H]
Identifier: 220932714
GI number: 220932714
Start: 2006060
End: 2007535
Strand: Direct
Name: gltX1 [H]
Synonym: Hore_18780
Alternate gene names: 220932714
Gene position: 2006060-2007535 (Clockwise)
Preceding gene: 220932677
Following gene: 220932747
Centisome position: 77.81
GC content: 42.62
Gene sequence:
>1476_bases ATGCCAGATAAAGTTAGAGTGAGGTTTGCCCCCAGTCCAACTGGAGATTTACATATAGGTGGGGTGAGAACAGCATTATT TAACTGGCTTTTTGCCCGTCACAATAACGGTGACTTTATTTTAAGGATAGAAGATACCGATGCCCAAAGATCTACAGAAG AGTCATCAAGACAGATAATAAAGGCCCTCAAGTGGGTTGGACTGGAATGGGATGAAGGCCCTGGAGTCGGAGGTGACTAT GGCCCCTATTTTCAATCTGAACGACAACAATTTTATCAAAAAGCCATAGATTACCTTTTAGAAAATGACAAAGCCTATTA CTGTTACTGTACCCCGGAAGAAATAGAAGACATGAAAAAAGAAGCGGATAAACGGGGAGAACCAGCTATTTATTCAGGAA AATGCTGCAATCTGACTGAAGAAGAAAGAAAGGAACTTGAAAAAGAGGGTCGCAAGCCAGTAGTCCGCCTTAAAACACCG GATGAAGGGTATACTGTAGTCAAAGACATTGTCAGAGGTAAAGTTTCTTTTGAAAACAGATTGTTAGAAGATTTAATAAT CATGAAGTCTGACGGAAAACCTACCTATAATTTTGCCTGTGTTGTTGACGACCACAGGATGGGAATTACCCATGTCATCA GGGCTGATGAGCACCTCTCCAATACCCCGAAACAGATAATGGTCTATAAAGCACTGGGTTACGATATTCCCAATTTTGCT CATGTTCCCATGATCCTGGCCCCGGACCGGACAAAACTCAGTAAACGCCATGGAGCCACTTCAGTGGACGAATTTATGGA ACAGGGTTATCTACCACAGGCATTAATTAATTACCTGTTATTACTCGGCTGGTCTCCGGGTAACAATGATGAAATTATCT CCCTCGACAGGGCTATCCGTGATTTTAAACTGGACGATGTATCCAAAAACCCGGCCGTATATGATACCAAGAAGCTGACC TGGGTTAATGGTCAGTATATGAGGAGTTTGCCACTGGAAGAAATTATTAAACATGCCCTCCCTCTTATCAAAGAGGCTGG CTTTGTTAACTTTCCTTTAAACACCGATGAGGAAGAAAGGCTTTATAAAATAATCGATGCTGTCCGGGAAAGGAGCCGGA CCCTGGTCGAACTTGTTGATGGAATCAGTTATTTTTACGATGATAACTTTGAATATGATGAAAAGGGTGTCAAAAAACAC TTCATGAAAGATGATACTATCACTATTCTCGAAAACGACATTGATTGCCTGAAAAAGGTAGAACCCTTTAACCGTGAAGC TATTGAAGAAATATACCGGGCCCGCAGTAAAGATCTTGGGGTCAAGGCCGCCCGCATGATTCATACCACCAGGCTGGCCC TCTCCGGAAGAACCTTTGGACCAGGGCTTTTTACCCTGGTGGAACTGGTAGGCAGGGAAGAAGCCATTAAAAGACTGGAA CGGGCTTTAGAATATGTTAAAAACAAACTTGACTAA
Upstream 100 bases:
>100_bases TATAAATTATGTCGTTTAATTATACATTAATGTATTTTCTTGTGTTAGGTTAACCATTTTGATATAATAGCTTTCAGAAT AACTAAGGAGGTTGTTTCCC
Downstream 100 bases:
>100_bases ATACCCGTACCATCCAGTAAGTAGCGATTCACCGAATGATTAACGGTGCTTAGAATATGTTGCCAGCTAGCGGTTGGCGT TACTAACCCCCCGTTCTGGA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase 1; GluRS 1 [H]
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MPDKVRVRFAPSPTGDLHIGGVRTALFNWLFARHNNGDFILRIEDTDAQRSTEESSRQIIKALKWVGLEWDEGPGVGGDY GPYFQSERQQFYQKAIDYLLENDKAYYCYCTPEEIEDMKKEADKRGEPAIYSGKCCNLTEEERKELEKEGRKPVVRLKTP DEGYTVVKDIVRGKVSFENRLLEDLIIMKSDGKPTYNFACVVDDHRMGITHVIRADEHLSNTPKQIMVYKALGYDIPNFA HVPMILAPDRTKLSKRHGATSVDEFMEQGYLPQALINYLLLLGWSPGNNDEIISLDRAIRDFKLDDVSKNPAVYDTKKLT WVNGQYMRSLPLEEIIKHALPLIKEAGFVNFPLNTDEEERLYKIIDAVRERSRTLVELVDGISYFYDDNFEYDEKGVKKH FMKDDTITILENDIDCLKKVEPFNREAIEEIYRARSKDLGVKAARMIHTTRLALSGRTFGPGLFTLVELVGREEAIKRLE RALEYVKNKLD
Sequences:
>Translated_491_residues MPDKVRVRFAPSPTGDLHIGGVRTALFNWLFARHNNGDFILRIEDTDAQRSTEESSRQIIKALKWVGLEWDEGPGVGGDY GPYFQSERQQFYQKAIDYLLENDKAYYCYCTPEEIEDMKKEADKRGEPAIYSGKCCNLTEEERKELEKEGRKPVVRLKTP DEGYTVVKDIVRGKVSFENRLLEDLIIMKSDGKPTYNFACVVDDHRMGITHVIRADEHLSNTPKQIMVYKALGYDIPNFA HVPMILAPDRTKLSKRHGATSVDEFMEQGYLPQALINYLLLLGWSPGNNDEIISLDRAIRDFKLDDVSKNPAVYDTKKLT WVNGQYMRSLPLEEIIKHALPLIKEAGFVNFPLNTDEEERLYKIIDAVRERSRTLVELVDGISYFYDDNFEYDEKGVKKH FMKDDTITILENDIDCLKKVEPFNREAIEEIYRARSKDLGVKAARMIHTTRLALSGRTFGPGLFTLVELVGREEAIKRLE RALEYVKNKLD >Mature_490_residues PDKVRVRFAPSPTGDLHIGGVRTALFNWLFARHNNGDFILRIEDTDAQRSTEESSRQIIKALKWVGLEWDEGPGVGGDYG PYFQSERQQFYQKAIDYLLENDKAYYCYCTPEEIEDMKKEADKRGEPAIYSGKCCNLTEEERKELEKEGRKPVVRLKTPD EGYTVVKDIVRGKVSFENRLLEDLIIMKSDGKPTYNFACVVDDHRMGITHVIRADEHLSNTPKQIMVYKALGYDIPNFAH VPMILAPDRTKLSKRHGATSVDEFMEQGYLPQALINYLLLLGWSPGNNDEIISLDRAIRDFKLDDVSKNPAVYDTKKLTW VNGQYMRSLPLEEIIKHALPLIKEAGFVNFPLNTDEEERLYKIIDAVRERSRTLVELVDGISYFYDDNFEYDEKGVKKHF MKDDTITILENDIDCLKKVEPFNREAIEEIYRARSKDLGVKAARMIHTTRLALSGRTFGPGLFTLVELVGREEAIKRLER ALEYVKNKLD
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=494, Percent_Identity=33.6032388663968, Blast_Score=270, Evalue=2e-72, Organism=Escherichia coli, GI1788743, Length=486, Percent_Identity=40.1234567901235, Blast_Score=372, Evalue=1e-104, Organism=Escherichia coli, GI226510925, Length=316, Percent_Identity=31.9620253164557, Blast_Score=151, Evalue=9e-38, Organism=Caenorhabditis elegans, GI71993394, Length=485, Percent_Identity=34.639175257732, Blast_Score=267, Evalue=7e-72, Organism=Saccharomyces cerevisiae, GI6324540, Length=505, Percent_Identity=34.4554455445545, Blast_Score=281, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6321192, Length=290, Percent_Identity=26.551724137931, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6324742, Length=113, Percent_Identity=35.3982300884956, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24665321, Length=499, Percent_Identity=36.0721442885772, Blast_Score=301, Evalue=7e-82, Organism=Drosophila melanogaster, GI24649466, Length=233, Percent_Identity=28.755364806867, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 56598; Mature: 56467
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDKVRVRFAPSPTGDLHIGGVRTALFNWLFARHNNGDFILRIEDTDAQRSTEESSRQII CCCCEEEEECCCCCCCEEECHHHHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHHHHHH KALKWVGLEWDEGPGVGGDYGPYFQSERQQFYQKAIDYLLENDKAYYCYCTPEEIEDMKK HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHH EADKRGEPAIYSGKCCNLTEEERKELEKEGRKPVVRLKTPDEGYTVVKDIVRGKVSFENR HHHCCCCCCEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCHHHHHHH LLEDLIIMKSDGKPTYNFACVVDDHRMGITHVIRADEHLSNTPKQIMVYKALGYDIPNFA HHHHHHEEECCCCCCEEEEEEEECCCCCHHHHHHCCHHHCCCCHHEEEEHHHCCCCCCCC HVPMILAPDRTKLSKRHGATSVDEFMEQGYLPQALINYLLLLGWSPGNNDEIISLDRAIR CCCEEECCCHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHH DFKLDDVSKNPAVYDTKKLTWVNGQYMRSLPLEEIIKHALPLIKEAGFVNFPLNTDEEER HCCCCCCCCCCCEEECCEEEEECCHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCCHHHH LYKIIDAVRERSRTLVELVDGISYFYDDNFEYDEKGVKKHFMKDDTITILENDIDCLKKV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHC EPFNREAIEEIYRARSKDLGVKAARMIHTTRLALSGRTFGPGLFTLVELVGREEAIKRLE CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCHHHHHHHHH RALEYVKNKLD HHHHHHHHHCC >Mature Secondary Structure PDKVRVRFAPSPTGDLHIGGVRTALFNWLFARHNNGDFILRIEDTDAQRSTEESSRQII CCCEEEEECCCCCCCEEECHHHHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHHHHHH KALKWVGLEWDEGPGVGGDYGPYFQSERQQFYQKAIDYLLENDKAYYCYCTPEEIEDMKK HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHH EADKRGEPAIYSGKCCNLTEEERKELEKEGRKPVVRLKTPDEGYTVVKDIVRGKVSFENR HHHCCCCCCEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCHHHHHHH LLEDLIIMKSDGKPTYNFACVVDDHRMGITHVIRADEHLSNTPKQIMVYKALGYDIPNFA HHHHHHEEECCCCCCEEEEEEEECCCCCHHHHHHCCHHHCCCCHHEEEEHHHCCCCCCCC HVPMILAPDRTKLSKRHGATSVDEFMEQGYLPQALINYLLLLGWSPGNNDEIISLDRAIR CCCEEECCCHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHH DFKLDDVSKNPAVYDTKKLTWVNGQYMRSLPLEEIIKHALPLIKEAGFVNFPLNTDEEER HCCCCCCCCCCCEEECCEEEEECCHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCCHHHH LYKIIDAVRERSRTLVELVDGISYFYDDNFEYDEKGVKKHFMKDDTITILENDIDCLKKV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHC EPFNREAIEEIYRARSKDLGVKAARMIHTTRLALSGRTFGPGLFTLVELVGREEAIKRLE CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCHHHHHHHHH RALEYVKNKLD HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]