Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932576

Identifier: 220932576

GI number: 220932576

Start: 1858191

End: 1858712

Strand: Direct

Name: 220932576

Synonym: Hore_17400

Alternate gene names: NA

Gene position: 1858191-1858712 (Clockwise)

Preceding gene: 220932575

Following gene: 220932598

Centisome position: 72.07

GC content: 29.12

Gene sequence:

>522_bases
ATGGGTGACAGATATTTAATTCGAATTATTAAGCAAAACTGGAAATTTATAGTGGTTATGATGATTGTCATTATTATTGG
TGGTATTATAATTAAAAATGTTGCAGAAATACCGTATGAAAATAAACATAAAATGGAAACCAGATTACCGGTTGAATTTG
AATATAATAACCAGACCATTAAAGGCTTTATATATGTAGTATACTGGGTTGAAACAGACCCAGAAGTTGTTGGTGACATG
GTTGTTAACGAATTAGAGCGGTATCTGGTAAAAAACGGGAGTATAAATCTTAACCCCCTTAAAAATCAGTTTATACGTAC
TTTAAAATCCTATTCTATCAAAGAAATAAAAAATAAATGTTACAGTGAAAGGCAATTTTTTGAGCTAAGGGATGATTATT
ATATGGATAATGACCCTGTTCTTAAAAAAATTGTAACAGGCAATAGATTCTCCATCCCTTTTAAATACGAAATCAAAAAG
GTGTTTTTTGTTTACCTTGAGGATTATTTTAAAATTGATTAA

Upstream 100 bases:

>100_bases
ATTTTGTAATATTTAAATTTTTCCTAATAAAACTGATTTCCCGGGAAATAAAAGGAATATTTGCCCTGATAGAGAAATAA
GAAATAAAAGGAGTGGTTTC

Downstream 100 bases:

>100_bases
GAACATTAAAAAAAGCCTGCTAATGAAAGCAGGCTTTTTTAATATATCTAATTCTCAAATGTCATAATAAAAATGTATGA
TAATTAGTTGTAAACGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MGDRYLIRIIKQNWKFIVVMMIVIIIGGIIIKNVAEIPYENKHKMETRLPVEFEYNNQTIKGFIYVVYWVETDPEVVGDM
VVNELERYLVKNGSINLNPLKNQFIRTLKSYSIKEIKNKCYSERQFFELRDDYYMDNDPVLKKIVTGNRFSIPFKYEIKK
VFFVYLEDYFKID

Sequences:

>Translated_173_residues
MGDRYLIRIIKQNWKFIVVMMIVIIIGGIIIKNVAEIPYENKHKMETRLPVEFEYNNQTIKGFIYVVYWVETDPEVVGDM
VVNELERYLVKNGSINLNPLKNQFIRTLKSYSIKEIKNKCYSERQFFELRDDYYMDNDPVLKKIVTGNRFSIPFKYEIKK
VFFVYLEDYFKID
>Mature_172_residues
GDRYLIRIIKQNWKFIVVMMIVIIIGGIIIKNVAEIPYENKHKMETRLPVEFEYNNQTIKGFIYVVYWVETDPEVVGDMV
VNELERYLVKNGSINLNPLKNQFIRTLKSYSIKEIKNKCYSERQFFELRDDYYMDNDPVLKKIVTGNRFSIPFKYEIKKV
FFVYLEDYFKID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20855; Mature: 20724

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDRYLIRIIKQNWKFIVVMMIVIIIGGIIIKNVAEIPYENKHKMETRLPVEFEYNNQTI
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEEEECCCEE
KGFIYVVYWVETDPEVVGDMVVNELERYLVKNGSINLNPLKNQFIRTLKSYSIKEIKNKC
EEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCHHHHHHHHH
YSERQFFELRDDYYMDNDPVLKKIVTGNRFSIPFKYEIKKVFFVYLEDYFKID
HCHHHHHHHCCCCCCCCCHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDRYLIRIIKQNWKFIVVMMIVIIIGGIIIKNVAEIPYENKHKMETRLPVEFEYNNQTI
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEEEECCCEE
KGFIYVVYWVETDPEVVGDMVVNELERYLVKNGSINLNPLKNQFIRTLKSYSIKEIKNKC
EEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCHHHHHHHHH
YSERQFFELRDDYYMDNDPVLKKIVTGNRFSIPFKYEIKKVFFVYLEDYFKID
HCHHHHHHHCCCCCCCCCHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA