Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932309

Identifier: 220932309

GI number: 220932309

Start: 1566914

End: 1567738

Strand: Direct

Name: 220932309

Synonym: Hore_14730

Alternate gene names: NA

Gene position: 1566914-1567738 (Clockwise)

Preceding gene: 220932297

Following gene: 220932322

Centisome position: 60.78

GC content: 39.76

Gene sequence:

>825_bases
ATGTCTTTTAAAAGAGTATTATTGACTCTATTAACCCTCACTATGATCCTGGGGCTGACAGCCTGTGATAACCTGTCTTT
TTTTGGCAAAGAAACCGGTGAAATCCAACTACTCCTGACCGATGCCCCGGCCGATAATGTAGAAAAATTACTGGTAACCA
TATCGAGAATAGAAACACATAACGACGAAGAGGGCTGGTTCACAATCCTGGAAGAGGAAAAAGAGTTTGATTTATTAGAA
CTTCAGGGGGTTTCTGAATTAATCGGCAAAGACTATTTACCTGAAGGACACTACACTCAAATGAGGGTTTATGTCTCCAA
AGCCCGGGTACAAGAATCTGGTAAAGATAGTACAGAACCTGTCGATATTCCTTCTGCAGATCAGACCGGTATTAAACTGG
TCAACTCATTTACTGTTTCTCCAGACAAGGTTACCGTCCTGTTGCTTGATTTTGATGCCAGAAAGTCTCTAATTTATCCA
AATAATAAATATAAACTTAAACCAACTATAAGGATTATTGAAAAAGTAATCTCAGGAGATATCCAGGGTAAGGTAGTTGA
CAGTAATGGTAATGGTATTGCTGAAGCAGCCATTACAGTTTATCACAATGATGAATTTACTGAAGAGGGGTATGTCACTT
CTACCAATAGTGGTAATGAAGGTGGCTTTAAACTTCTCGGCCTCGTGGAAGGAACCTATGACCTTGAAATTACTGCCGAC
AACTATGATGAATCAACAATAATCGAAGATGTCCAGGTTACAGCCGGTGAGGTTACAACACTGGGTGAAATTGAGCTGAC
ATCAAATCAAACTCAGACCAATTAG

Upstream 100 bases:

>100_bases
TTTTTAAATTTTTTTTACCCCACCCGGTGTGATACAGGTCACTTAAACCAATCAGTAAATAACTTATCCTTAAAATACAA
AAATGAAAGGAGGGATAAAG

Downstream 100 bases:

>100_bases
TTCAGTTCTATCTCAATTTAAAAAATAAATAACATCAAAAAAATCAATTATAACAGGTATAATAAAAATATTTAACAAAA
AAGGAGAGGGATTTACCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSFKRVLLTLLTLTMILGLTACDNLSFFGKETGEIQLLLTDAPADNVEKLLVTISRIETHNDEEGWFTILEEEKEFDLLE
LQGVSELIGKDYLPEGHYTQMRVYVSKARVQESGKDSTEPVDIPSADQTGIKLVNSFTVSPDKVTVLLLDFDARKSLIYP
NNKYKLKPTIRIIEKVISGDIQGKVVDSNGNGIAEAAITVYHNDEFTEEGYVTSTNSGNEGGFKLLGLVEGTYDLEITAD
NYDESTIIEDVQVTAGEVTTLGEIELTSNQTQTN

Sequences:

>Translated_274_residues
MSFKRVLLTLLTLTMILGLTACDNLSFFGKETGEIQLLLTDAPADNVEKLLVTISRIETHNDEEGWFTILEEEKEFDLLE
LQGVSELIGKDYLPEGHYTQMRVYVSKARVQESGKDSTEPVDIPSADQTGIKLVNSFTVSPDKVTVLLLDFDARKSLIYP
NNKYKLKPTIRIIEKVISGDIQGKVVDSNGNGIAEAAITVYHNDEFTEEGYVTSTNSGNEGGFKLLGLVEGTYDLEITAD
NYDESTIIEDVQVTAGEVTTLGEIELTSNQTQTN
>Mature_273_residues
SFKRVLLTLLTLTMILGLTACDNLSFFGKETGEIQLLLTDAPADNVEKLLVTISRIETHNDEEGWFTILEEEKEFDLLEL
QGVSELIGKDYLPEGHYTQMRVYVSKARVQESGKDSTEPVDIPSADQTGIKLVNSFTVSPDKVTVLLLDFDARKSLIYPN
NKYKLKPTIRIIEKVISGDIQGKVVDSNGNGIAEAAITVYHNDEFTEEGYVTSTNSGNEGGFKLLGLVEGTYDLEITADN
YDESTIIEDVQVTAGEVTTLGEIELTSNQTQTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30270; Mature: 30139

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKRVLLTLLTLTMILGLTACDNLSFFGKETGEIQLLLTDAPADNVEKLLVTISRIETH
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCC
NDEEGWFTILEEEKEFDLLELQGVSELIGKDYLPEGHYTQMRVYVSKARVQESGKDSTEP
CCCCCEEEEEECCCCCCEEECCCHHHHHCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCC
VDIPSADQTGIKLVNSFTVSPDKVTVLLLDFDARKSLIYPNNKYKLKPTIRIIEKVISGD
CCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCEECCCCCEEECHHHHHHHHHHCCC
IQGKVVDSNGNGIAEAAITVYHNDEFTEEGYVTSTNSGNEGGFKLLGLVEGTYDLEITAD
CCEEEEECCCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCEEEEEEEEC
NYDESTIIEDVQVTAGEVTTLGEIELTSNQTQTN
CCCCCHHHHHEEECCCCEEEEEEEEEECCCCCCC
>Mature Secondary Structure 
SFKRVLLTLLTLTMILGLTACDNLSFFGKETGEIQLLLTDAPADNVEKLLVTISRIETH
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCC
NDEEGWFTILEEEKEFDLLELQGVSELIGKDYLPEGHYTQMRVYVSKARVQESGKDSTEP
CCCCCEEEEEECCCCCCEEECCCHHHHHCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCC
VDIPSADQTGIKLVNSFTVSPDKVTVLLLDFDARKSLIYPNNKYKLKPTIRIIEKVISGD
CCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCEECCCCCEEECHHHHHHHHHHCCC
IQGKVVDSNGNGIAEAAITVYHNDEFTEEGYVTSTNSGNEGGFKLLGLVEGTYDLEITAD
CCEEEEECCCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCEEEEEEEEC
NYDESTIIEDVQVTAGEVTTLGEIELTSNQTQTN
CCCCCHHHHHEEECCCCEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA