Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220932283
Identifier: 220932283
GI number: 220932283
Start: 1538297
End: 1538692
Strand: Direct
Name: 220932283
Synonym: Hore_14470
Alternate gene names: NA
Gene position: 1538297-1538692 (Clockwise)
Preceding gene: 220932282
Following gene: 220932284
Centisome position: 59.67
GC content: 36.11
Gene sequence:
>396_bases ATGCTATATTTTAACTATACAGTCGGCTTTTTAATTGCATCTATTCTTCAGGGGGCCATTATTATTCTGGGTGAAATACT CAACCTCTCTAAATTCAAAATGACACCCGGTCTTGATTCCATTCTTATTTACCTGATTATAGGCCAGATGGCAGGTTACC TTTTAATGTATCTTATGACCTTTAAACCAATACGTCTTATAAACCCCTGGCTTCTGGGGACAATCTATGGCATTTTTTTA TGGTATTTAATTTCTTCTTTTGTCTCTACTTTCGGAATATTACCTTTACCGTGGACTACTGGGATTAGCACATCCCTTGT GTCTCTTCTGGCTTTTATTGTTTACGGTCTTATCGCCTGTTTTACAATAAAAAAATATACCAATGTCATGGCCTAA
Upstream 100 bases:
>100_bases TAGTAAAACAGTGCATTATAACAATTGAGTTAATTGAGTCATAAAGTCAATATATGAAATACATAAGGCAAGGATAATTC AGGGCCAGGAGGATTCATTC
Downstream 100 bases:
>100_bases AGGGGGGAAAACTTTATGAGAATTCCAGACCATATCGGAGTTATACCAGATGGAAACCGACGCTGGGCTTTAAGTCATGG TTTAACCAGGGAAAAAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MLYFNYTVGFLIASILQGAIIILGEILNLSKFKMTPGLDSILIYLIIGQMAGYLLMYLMTFKPIRLINPWLLGTIYGIFL WYLISSFVSTFGILPLPWTTGISTSLVSLLAFIVYGLIACFTIKKYTNVMA
Sequences:
>Translated_131_residues MLYFNYTVGFLIASILQGAIIILGEILNLSKFKMTPGLDSILIYLIIGQMAGYLLMYLMTFKPIRLINPWLLGTIYGIFL WYLISSFVSTFGILPLPWTTGISTSLVSLLAFIVYGLIACFTIKKYTNVMA >Mature_131_residues MLYFNYTVGFLIASILQGAIIILGEILNLSKFKMTPGLDSILIYLIIGQMAGYLLMYLMTFKPIRLINPWLLGTIYGIFL WYLISSFVSTFGILPLPWTTGISTSLVSLLAFIVYGLIACFTIKKYTNVMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14710; Mature: 14710
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYFNYTVGFLIASILQGAIIILGEILNLSKFKMTPGLDSILIYLIIGQMAGYLLMYLMT CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FKPIRLINPWLLGTIYGIFLWYLISSFVSTFGILPLPWTTGISTSLVSLLAFIVYGLIAC HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FTIKKYTNVMA HHHHHHHHHCC >Mature Secondary Structure MLYFNYTVGFLIASILQGAIIILGEILNLSKFKMTPGLDSILIYLIIGQMAGYLLMYLMT CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FKPIRLINPWLLGTIYGIFLWYLISSFVSTFGILPLPWTTGISTSLVSLLAFIVYGLIAC HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FTIKKYTNVMA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA