Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is yuiD [H]

Identifier: 220932274

GI number: 220932274

Start: 1523903

End: 1524331

Strand: Direct

Name: yuiD [H]

Synonym: Hore_14380

Alternate gene names: 220932274

Gene position: 1523903-1524331 (Clockwise)

Preceding gene: 220932242

Following gene: 220932282

Centisome position: 59.11

GC content: 39.16

Gene sequence:

>429_bases
ATGAGTTTGCTTGAAATTTCCTTGCTTTCACTATTTATAGCCCAGGTCTTAAAAATCTTTACAACTCTGCCACCTGACTT
TAGCCGGATTATAGGTTCAGGAGGAATGCCAAGCTCCCATGCTTCCTTTGTATCTACTCTCTCCACTACAGTAGGGTTGA
ATTACGGGTTTGATTCCGACCTCTTTGCAATTGTTACTGTTTTTTCATTAATAATAATATACGATGCCGGTGGTGTCAGA
CGGGCCGTTGGCGAACAGGCCAATGTTCTCAACCATTTAATAAAACACCTGGAACTGGGTAAACTCGGCAAAGAAAAAAA
AATAATTAAAAAAGACCTCAGGGAGTTAATAGGCCATACTCCCTTTGAAGTCCTGGCTGGTACAATATTAGGTGTTTTCA
TTGCCCTCATAAATTATTATTATCTTTAA

Upstream 100 bases:

>100_bases
CCCGTAATTAACACCTTTTATATACAAAACACCTTGCAATAGGAAAATTTTTTTTATACAATTAAATTTGTTTAAAAAGT
GATTCTTTAGAGGTGTTATT

Downstream 100 bases:

>100_bases
TCCTAATATACCTAACTTTACTTAACACTATATTGTCAATAATATATTAACAAAAACATAATATCACAAACCTATAATTC
CTCTTTTATATATTTCTCCA

Product: acid phosphatase/vanadium-dependent haloperoxidase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSLLEISLLSLFIAQVLKIFTTLPPDFSRIIGSGGMPSSHASFVSTLSTTVGLNYGFDSDLFAIVTVFSLIIIYDAGGVR
RAVGEQANVLNHLIKHLELGKLGKEKKIIKKDLRELIGHTPFEVLAGTILGVFIALINYYYL

Sequences:

>Translated_142_residues
MSLLEISLLSLFIAQVLKIFTTLPPDFSRIIGSGGMPSSHASFVSTLSTTVGLNYGFDSDLFAIVTVFSLIIIYDAGGVR
RAVGEQANVLNHLIKHLELGKLGKEKKIIKKDLRELIGHTPFEVLAGTILGVFIALINYYYL
>Mature_141_residues
SLLEISLLSLFIAQVLKIFTTLPPDFSRIIGSGGMPSSHASFVSTLSTTVGLNYGFDSDLFAIVTVFSLIIIYDAGGVRR
AVGEQANVLNHLIKHLELGKLGKEKKIIKKDLRELIGHTPFEVLAGTILGVFIALINYYYL

Specific function: Unknown

COG id: COG1963

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003832 [H]

Pfam domain/function: PF02681 DUF212 [H]

EC number: NA

Molecular weight: Translated: 15527; Mature: 15395

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLEISLLSLFIAQVLKIFTTLPPDFSRIIGSGGMPSSHASFVSTLSTTVGLNYGFDSD
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
LFAIVTVFSLIIIYDAGGVRRAVGEQANVLNHLIKHLELGKLGKEKKIIKKDLRELIGHT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PFEVLAGTILGVFIALINYYYL
CHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLLEISLLSLFIAQVLKIFTTLPPDFSRIIGSGGMPSSHASFVSTLSTTVGLNYGFDSD
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
LFAIVTVFSLIIIYDAGGVRRAVGEQANVLNHLIKHLELGKLGKEKKIIKKDLRELIGHT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PFEVLAGTILGVFIALINYYYL
CHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]