Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220932167
Identifier: 220932167
GI number: 220932167
Start: 1429607
End: 1430119
Strand: Direct
Name: 220932167
Synonym: Hore_13300
Alternate gene names: NA
Gene position: 1429607-1430119 (Clockwise)
Preceding gene: 220932166
Following gene: 220932190
Centisome position: 55.45
GC content: 35.48
Gene sequence:
>513_bases TTGAATAAAAAGTTTGTTATTGCAGGACTACTTATCTTAAGCCTTGCTATAACAGGTGCAAGTATTAACACTCTGGCCTT CGGTGGAGGACCCTACAACAATAATTCCACACCTTATAGCAATTATGATATGTTCGAATACCTGGGTCTAACCAGTAGTC AGGTCGAGGCTTTAAGTAATTTAAAGAGAGATTTTAGCCTTGAAAGAGATAAAATAAGACTGGAAATGCGAAAAGCAGTT TATGAATTAAGGGATTTAATTTTTTCCAATATAGAATCAAAAGAGATTAACCTGGCCAAAGAAAGACTTAATGAACTACA AAACAAACTATTAGATCTGAGAATAAGGTATCTTCAGGAATATAAGAATATCCTGACTCCTGAACAACTGGAAAAAATAA AAGTTTTTCCTTTTAAAAATGGGTTTAACTGGAACAACAGGTGGGCAGGTAAAGGATGGAACCGGAGAAATCGACAAAAT TTTGGTCCGGTCTGCCCCTTCCTGTTTAACTAA
Upstream 100 bases:
>100_bases TTCAAATTTATCTCCTATAATTATAACAGGGTCGAAAAATACAGATTAAATAACGGCAAAGCAGAAACGGCCCTTAACTA AAAAAAAGGAGATGGTTGAA
Downstream 100 bases:
>100_bases AAACAAATATAATAAACTAAAACCCCCTGTAAGTTAACCACAGCTCCAGTGGTATCTTCCAGGGGGTTTTTATCACGAAA AAATAAAAAATTTAACCCCG
Product: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MNKKFVIAGLLILSLAITGASINTLAFGGGPYNNNSTPYSNYDMFEYLGLTSSQVEALSNLKRDFSLERDKIRLEMRKAV YELRDLIFSNIESKEINLAKERLNELQNKLLDLRIRYLQEYKNILTPEQLEKIKVFPFKNGFNWNNRWAGKGWNRRNRQN FGPVCPFLFN
Sequences:
>Translated_170_residues MNKKFVIAGLLILSLAITGASINTLAFGGGPYNNNSTPYSNYDMFEYLGLTSSQVEALSNLKRDFSLERDKIRLEMRKAV YELRDLIFSNIESKEINLAKERLNELQNKLLDLRIRYLQEYKNILTPEQLEKIKVFPFKNGFNWNNRWAGKGWNRRNRQN FGPVCPFLFN >Mature_170_residues MNKKFVIAGLLILSLAITGASINTLAFGGGPYNNNSTPYSNYDMFEYLGLTSSQVEALSNLKRDFSLERDKIRLEMRKAV YELRDLIFSNIESKEINLAKERLNELQNKLLDLRIRYLQEYKNILTPEQLEKIKVFPFKNGFNWNNRWAGKGWNRRNRQN FGPVCPFLFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19864; Mature: 19864
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKFVIAGLLILSLAITGASINTLAFGGGPYNNNSTPYSNYDMFEYLGLTSSQVEALSN CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHH LKRDFSLERDKIRLEMRKAVYELRDLIFSNIESKEINLAKERLNELQNKLLDLRIRYLQE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKNILTPEQLEKIKVFPFKNGFNWNNRWAGKGWNRRNRQNFGPVCPFLFN HHHCCCHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKKFVIAGLLILSLAITGASINTLAFGGGPYNNNSTPYSNYDMFEYLGLTSSQVEALSN CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHH LKRDFSLERDKIRLEMRKAVYELRDLIFSNIESKEINLAKERLNELQNKLLDLRIRYLQE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKNILTPEQLEKIKVFPFKNGFNWNNRWAGKGWNRRNRQNFGPVCPFLFN HHHCCCHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA