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The map label for this gene is trkA1 [H]

Identifier: 220931900

GI number: 220931900

Start: 1147278

End: 1148621

Strand: Direct

Name: trkA1 [H]

Synonym: Hore_10580

Alternate gene names: 220931900

Gene position: 1147278-1148621 (Clockwise)

Preceding gene: 220931899

Following gene: 220931902

Centisome position: 44.5

GC content: 31.62

Gene sequence:

>1344_bases
ATGTTATTTAATAAGGGGGATAAAACAATTGTTATTATGGGTGATAATAAAATAACAGTGAGTATAGCCCGGATATTAAG
TAAAAATAATGATGTAGTTTTGATTTCTAAAGACCCTCTGCTACTGGAGAATAACAGGGCCCTGGATGTTGAGTTTATTG
TCAGTAGTAATAAAGGACTATTTTCTATAATGGATAATATTGGTTTTAAAAAATCTGACATATTCTTATCCTTGACCGCC
AGTGATGAATTTAATTTATTTGCCTCTTACCTGGCTAAAAATAAAGGAGCTGATAAGACTGTAAGTCTTGTTAACAATAA
TTCTTATCTGGAATTAGAAGCAGGTGACTGGGTTGATTTGATATTTAATCCCAACCAGATATTAACCGATCTAATCAGTG
TTCTGTTAAAGGATACCAGATTAATAAATATAAAAAACCTAATACCGGGTAAAGTTGATGTTACCCAGGTTACGGTTACT
CCTGGTGATAAATTATCATATTTAAAAATAAAAAATATAGATTTTAATAATGGAATTATTGTTGCCATTAAAAGAGGAAA
TAAATATATTTTTCCAGACCCAGAATTACCATTATACCCTGACGACAGGTTATTTATATTATATAAGAGGGGAATGGTCA
GTAAATTATTAAAAAATTTTATAAAAAAGCGCCATAGTAAAAAGAAAATATTTATTCTGGGGGGTAATAAACTTTCCGTG
TCACTGGTAAAGGCCTGGGAGGGCATATATAAGAGGTTAATAATTATTGAACCTGATTTAAATCAGTGTAATCATCTTGC
TGAAAAACTTGAAGATATTTTAATACTTCATGGAAATGGTGTAGACCTTAATTTGCTAAGGGAAGAAGGACTTGATAAGG
ATAGTATTTATGTTGGTTCCAGTCTTGGTGATTTATCAAATATTCTGGGTAGTTATATTGCCATGAAAACTGGTTGTACA
GAAGTAGTTACTGTATTACATAACCCAGTTTATAAAGGAGTAGCTAATATCCTGGGCCTGAAGATGGTTATAAGTTTACC
GGAACAGATAGCAAAATATGTGTCCAATTATTTATCTTCAGGTGAGGATATAAACCCCCATATATTTGGAGATAGAATTA
GAATACGACAGATTCAAATAAACACACTTCCTCCCCGTTTAAGGGGTAATCTCGGAGAACTTGTAATACCACAGGGAGTA
ATTATAGCTGTAATATTGAGAAAAGGCCAGACCTTGATACCTGCTAAAAATAATAAAATTAAAAAGGGGGATAAGTTAGT
TATAATCTATGATGTAGATAGGGAAGATAAAGTTATGGGATTTTTTTATGAATTTAGGAATTAA

Upstream 100 bases:

>100_bases
GGGTTTTTAATCCCTTTCTTTTTTTTATTTTTTAAAGTATTGAAAAAAGATCTAAACATATATTTTATACAAAGGAGTTG
ATACCAAGTGGTGAAAATTA

Downstream 100 bases:

>100_bases
AATACTCTATTTATATTTGTTTAGTATTTAAAAATACATGAATGGCCCTCAGGGGTTAATGGTTATGGCCAGAAGCCATA
TTGTTTTTTATCCCCAGTTG

Product: TrkA-N domain-containing protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA homolog 1 [H]

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MLFNKGDKTIVIMGDNKITVSIARILSKNNDVVLISKDPLLLENNRALDVEFIVSSNKGLFSIMDNIGFKKSDIFLSLTA
SDEFNLFASYLAKNKGADKTVSLVNNNSYLELEAGDWVDLIFNPNQILTDLISVLLKDTRLINIKNLIPGKVDVTQVTVT
PGDKLSYLKIKNIDFNNGIIVAIKRGNKYIFPDPELPLYPDDRLFILYKRGMVSKLLKNFIKKRHSKKKIFILGGNKLSV
SLVKAWEGIYKRLIIIEPDLNQCNHLAEKLEDILILHGNGVDLNLLREEGLDKDSIYVGSSLGDLSNILGSYIAMKTGCT
EVVTVLHNPVYKGVANILGLKMVISLPEQIAKYVSNYLSSGEDINPHIFGDRIRIRQIQINTLPPRLRGNLGELVIPQGV
IIAVILRKGQTLIPAKNNKIKKGDKLVIIYDVDREDKVMGFFYEFRN

Sequences:

>Translated_447_residues
MLFNKGDKTIVIMGDNKITVSIARILSKNNDVVLISKDPLLLENNRALDVEFIVSSNKGLFSIMDNIGFKKSDIFLSLTA
SDEFNLFASYLAKNKGADKTVSLVNNNSYLELEAGDWVDLIFNPNQILTDLISVLLKDTRLINIKNLIPGKVDVTQVTVT
PGDKLSYLKIKNIDFNNGIIVAIKRGNKYIFPDPELPLYPDDRLFILYKRGMVSKLLKNFIKKRHSKKKIFILGGNKLSV
SLVKAWEGIYKRLIIIEPDLNQCNHLAEKLEDILILHGNGVDLNLLREEGLDKDSIYVGSSLGDLSNILGSYIAMKTGCT
EVVTVLHNPVYKGVANILGLKMVISLPEQIAKYVSNYLSSGEDINPHIFGDRIRIRQIQINTLPPRLRGNLGELVIPQGV
IIAVILRKGQTLIPAKNNKIKKGDKLVIIYDVDREDKVMGFFYEFRN
>Mature_447_residues
MLFNKGDKTIVIMGDNKITVSIARILSKNNDVVLISKDPLLLENNRALDVEFIVSSNKGLFSIMDNIGFKKSDIFLSLTA
SDEFNLFASYLAKNKGADKTVSLVNNNSYLELEAGDWVDLIFNPNQILTDLISVLLKDTRLINIKNLIPGKVDVTQVTVT
PGDKLSYLKIKNIDFNNGIIVAIKRGNKYIFPDPELPLYPDDRLFILYKRGMVSKLLKNFIKKRHSKKKIFILGGNKLSV
SLVKAWEGIYKRLIIIEPDLNQCNHLAEKLEDILILHGNGVDLNLLREEGLDKDSIYVGSSLGDLSNILGSYIAMKTGCT
EVVTVLHNPVYKGVANILGLKMVISLPEQIAKYVSNYLSSGEDINPHIFGDRIRIRQIQINTLPPRLRGNLGELVIPQGV
IIAVILRKGQTLIPAKNNKIKKGDKLVIIYDVDREDKVMGFFYEFRN

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=480, Percent_Identity=22.5, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 50168; Mature: 50168

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFNKGDKTIVIMGDNKITVSIARILSKNNDVVLISKDPLLLENNRALDVEFIVSSNKGL
CCCCCCCCEEEEECCCEEEEEEEHHHCCCCCEEEEECCCEEEECCCEEEEEEEEECCCCH
FSIMDNIGFKKSDIFLSLTASDEFNLFASYLAKNKGADKTVSLVNNNSYLELEAGDWVDL
HHHHHHCCCEECCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCEEEE
IFNPNQILTDLISVLLKDTRLINIKNLIPGKVDVTQVTVTPGDKLSYLKIKNIDFNNGII
EECCHHHHHHHHHHHHCCCEEEEEHHCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCEE
VAIKRGNKYIFPDPELPLYPDDRLFILYKRGMVSKLLKNFIKKRHSKKKIFILGGNKLSV
EEEECCCEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
SLVKAWEGIYKRLIIIEPDLNQCNHLAEKLEDILILHGNGVDLNLLREEGLDKDSIYVGS
HHHHHHHHHHEEEEEECCCHHHHHHHHHHHCEEEEECCCCCEEEEHHHCCCCCCCEEECC
SLGDLSNILGSYIAMKTGCTEVVTVLHNPVYKGVANILGLKMVISLPEQIAKYVSNYLSS
CHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEDINPHIFGDRIRIRQIQINTLPPRLRGNLGELVIPQGVIIAVILRKGQTLIPAKNNKI
CCCCCCCEECCEEEEEEEEEECCCHHHCCCCCCEECCCCCEEEEEECCCCEEECCCCCCC
KKGDKLVIIYDVDREDKVMGFFYEFRN
CCCCEEEEEEECCCCCCEEEEEEEECC
>Mature Secondary Structure
MLFNKGDKTIVIMGDNKITVSIARILSKNNDVVLISKDPLLLENNRALDVEFIVSSNKGL
CCCCCCCCEEEEECCCEEEEEEEHHHCCCCCEEEEECCCEEEECCCEEEEEEEEECCCCH
FSIMDNIGFKKSDIFLSLTASDEFNLFASYLAKNKGADKTVSLVNNNSYLELEAGDWVDL
HHHHHHCCCEECCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCEEEE
IFNPNQILTDLISVLLKDTRLINIKNLIPGKVDVTQVTVTPGDKLSYLKIKNIDFNNGII
EECCHHHHHHHHHHHHCCCEEEEEHHCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCEE
VAIKRGNKYIFPDPELPLYPDDRLFILYKRGMVSKLLKNFIKKRHSKKKIFILGGNKLSV
EEEECCCEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
SLVKAWEGIYKRLIIIEPDLNQCNHLAEKLEDILILHGNGVDLNLLREEGLDKDSIYVGS
HHHHHHHHHHEEEEEECCCHHHHHHHHHHHCEEEEECCCCCEEEEHHHCCCCCCCEEECC
SLGDLSNILGSYIAMKTGCTEVVTVLHNPVYKGVANILGLKMVISLPEQIAKYVSNYLSS
CHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEDINPHIFGDRIRIRQIQINTLPPRLRGNLGELVIPQGVIIAVILRKGQTLIPAKNNKI
CCCCCCCEECCEEEEEEEEEECCCHHHCCCCCCEECCCCCEEEEEECCCCEEECCCCCCC
KKGDKLVIIYDVDREDKVMGFFYEFRN
CCCCEEEEEEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8268235; 12125824 [H]