Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220931889

Identifier: 220931889

GI number: 220931889

Start: 1136823

End: 1137488

Strand: Direct

Name: 220931889

Synonym: Hore_10460

Alternate gene names: NA

Gene position: 1136823-1137488 (Clockwise)

Preceding gene: 220931888

Following gene: 220931890

Centisome position: 44.09

GC content: 42.04

Gene sequence:

>666_bases
ATGTCAATTGGTGCATTACTTCTTATTGTTCTAGGAGTTTTGATTTATTTTGGGGCTGCCCAGCGAGTACTGGATAAATT
ATATTTAACTGATATTATGGCTCTGGTTGTTATTGCCGGTATTATTATCGGTAGTTTCGTTGATTTTACCGTACTGCGGA
ATCCAGTGGTAACTATAAACCTGGGAGGGGCAATAATACCGGTTATTCTGGCTATTTACGTTTTAAGCAGGGCCGGTACT
TACCGCGAACTGGTACGGACTATTATAGCAGTTGTCTTAACTGGTGGGGCTATATATGGTTTAAGTCAATTTTTTAAAAA
TTTTGGTCATGGCAGGGATATCATCGACCCCATGTATGTTTTTGCCATCAGTGGAGGTGTTATTGCCTATTTACTGGGAA
GATCGAGGAGGGCTTCATTTATAGCAGGGACCCTAGGATATTTAACTTATAATTTAATTATTTTGGGGCAGGTATTAACT
GGACGTGTTGTTTCTCAGGTTATGATCGGGGGAGCGGGTGCCTTTGATAGTATTATTATTTCGGGTTTACTGGCTGTGCT
ACTGGCTGAACTGGTCGGTGAGACCAGGGAACGCATCCAGGGAGGACCGGTCAGGGGTAATAATTTACCTGGCAAAGAAA
GGAGGAGTGATGATGATGAGAAGTAA

Upstream 100 bases:

>100_bases
TTTAGATCATAACCGCCTCCGGGCGGTATTTTTTTTATGTATATACAACCTGATTGTGGGAAACATATTTTATAAAGAAT
ACCAACCTGGAGGTGGCATG

Downstream 100 bases:

>100_bases
TAGAGGTCTTTACAGTATACTTTTTATTTTTATAATTATATTATCATTGTCTGGATTTGTTTCTGCAGAATTTGTTGGCC
ACATTGAAGAAAATTGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSIGALLLIVLGVLIYFGAAQRVLDKLYLTDIMALVVIAGIIIGSFVDFTVLRNPVVTINLGGAIIPVILAIYVLSRAGT
YRELVRTIIAVVLTGGAIYGLSQFFKNFGHGRDIIDPMYVFAISGGVIAYLLGRSRRASFIAGTLGYLTYNLIILGQVLT
GRVVSQVMIGGAGAFDSIIISGLLAVLLAELVGETRERIQGGPVRGNNLPGKERRSDDDEK

Sequences:

>Translated_221_residues
MSIGALLLIVLGVLIYFGAAQRVLDKLYLTDIMALVVIAGIIIGSFVDFTVLRNPVVTINLGGAIIPVILAIYVLSRAGT
YRELVRTIIAVVLTGGAIYGLSQFFKNFGHGRDIIDPMYVFAISGGVIAYLLGRSRRASFIAGTLGYLTYNLIILGQVLT
GRVVSQVMIGGAGAFDSIIISGLLAVLLAELVGETRERIQGGPVRGNNLPGKERRSDDDEK
>Mature_220_residues
SIGALLLIVLGVLIYFGAAQRVLDKLYLTDIMALVVIAGIIIGSFVDFTVLRNPVVTINLGGAIIPVILAIYVLSRAGTY
RELVRTIIAVVLTGGAIYGLSQFFKNFGHGRDIIDPMYVFAISGGVIAYLLGRSRRASFIAGTLGYLTYNLIILGQVLTG
RVVSQVMIGGAGAFDSIIISGLLAVLLAELVGETRERIQGGPVRGNNLPGKERRSDDDEK

Specific function: Unknown

COG id: COG4089

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23583; Mature: 23452

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGALLLIVLGVLIYFGAAQRVLDKLYLTDIMALVVIAGIIIGSFVDFTVLRNPVVTIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
LGGAIIPVILAIYVLSRAGTYRELVRTIIAVVLTGGAIYGLSQFFKNFGHGRDIIDPMYV
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHH
FAISGGVIAYLLGRSRRASFIAGTLGYLTYNLIILGQVLTGRVVSQVMIGGAGAFDSIII
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SGLLAVLLAELVGETRERIQGGPVRGNNLPGKERRSDDDEK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SIGALLLIVLGVLIYFGAAQRVLDKLYLTDIMALVVIAGIIIGSFVDFTVLRNPVVTIN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
LGGAIIPVILAIYVLSRAGTYRELVRTIIAVVLTGGAIYGLSQFFKNFGHGRDIIDPMYV
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHH
FAISGGVIAYLLGRSRRASFIAGTLGYLTYNLIILGQVLTGRVVSQVMIGGAGAFDSIII
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SGLLAVLLAELVGETRERIQGGPVRGNNLPGKERRSDDDEK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA