Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220931889
Identifier: 220931889
GI number: 220931889
Start: 1136823
End: 1137488
Strand: Direct
Name: 220931889
Synonym: Hore_10460
Alternate gene names: NA
Gene position: 1136823-1137488 (Clockwise)
Preceding gene: 220931888
Following gene: 220931890
Centisome position: 44.09
GC content: 42.04
Gene sequence:
>666_bases ATGTCAATTGGTGCATTACTTCTTATTGTTCTAGGAGTTTTGATTTATTTTGGGGCTGCCCAGCGAGTACTGGATAAATT ATATTTAACTGATATTATGGCTCTGGTTGTTATTGCCGGTATTATTATCGGTAGTTTCGTTGATTTTACCGTACTGCGGA ATCCAGTGGTAACTATAAACCTGGGAGGGGCAATAATACCGGTTATTCTGGCTATTTACGTTTTAAGCAGGGCCGGTACT TACCGCGAACTGGTACGGACTATTATAGCAGTTGTCTTAACTGGTGGGGCTATATATGGTTTAAGTCAATTTTTTAAAAA TTTTGGTCATGGCAGGGATATCATCGACCCCATGTATGTTTTTGCCATCAGTGGAGGTGTTATTGCCTATTTACTGGGAA GATCGAGGAGGGCTTCATTTATAGCAGGGACCCTAGGATATTTAACTTATAATTTAATTATTTTGGGGCAGGTATTAACT GGACGTGTTGTTTCTCAGGTTATGATCGGGGGAGCGGGTGCCTTTGATAGTATTATTATTTCGGGTTTACTGGCTGTGCT ACTGGCTGAACTGGTCGGTGAGACCAGGGAACGCATCCAGGGAGGACCGGTCAGGGGTAATAATTTACCTGGCAAAGAAA GGAGGAGTGATGATGATGAGAAGTAA
Upstream 100 bases:
>100_bases TTTAGATCATAACCGCCTCCGGGCGGTATTTTTTTTATGTATATACAACCTGATTGTGGGAAACATATTTTATAAAGAAT ACCAACCTGGAGGTGGCATG
Downstream 100 bases:
>100_bases TAGAGGTCTTTACAGTATACTTTTTATTTTTATAATTATATTATCATTGTCTGGATTTGTTTCTGCAGAATTTGTTGGCC ACATTGAAGAAAATTGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSIGALLLIVLGVLIYFGAAQRVLDKLYLTDIMALVVIAGIIIGSFVDFTVLRNPVVTINLGGAIIPVILAIYVLSRAGT YRELVRTIIAVVLTGGAIYGLSQFFKNFGHGRDIIDPMYVFAISGGVIAYLLGRSRRASFIAGTLGYLTYNLIILGQVLT GRVVSQVMIGGAGAFDSIIISGLLAVLLAELVGETRERIQGGPVRGNNLPGKERRSDDDEK
Sequences:
>Translated_221_residues MSIGALLLIVLGVLIYFGAAQRVLDKLYLTDIMALVVIAGIIIGSFVDFTVLRNPVVTINLGGAIIPVILAIYVLSRAGT YRELVRTIIAVVLTGGAIYGLSQFFKNFGHGRDIIDPMYVFAISGGVIAYLLGRSRRASFIAGTLGYLTYNLIILGQVLT GRVVSQVMIGGAGAFDSIIISGLLAVLLAELVGETRERIQGGPVRGNNLPGKERRSDDDEK >Mature_220_residues SIGALLLIVLGVLIYFGAAQRVLDKLYLTDIMALVVIAGIIIGSFVDFTVLRNPVVTINLGGAIIPVILAIYVLSRAGTY RELVRTIIAVVLTGGAIYGLSQFFKNFGHGRDIIDPMYVFAISGGVIAYLLGRSRRASFIAGTLGYLTYNLIILGQVLTG RVVSQVMIGGAGAFDSIIISGLLAVLLAELVGETRERIQGGPVRGNNLPGKERRSDDDEK
Specific function: Unknown
COG id: COG4089
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23583; Mature: 23452
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGALLLIVLGVLIYFGAAQRVLDKLYLTDIMALVVIAGIIIGSFVDFTVLRNPVVTIN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE LGGAIIPVILAIYVLSRAGTYRELVRTIIAVVLTGGAIYGLSQFFKNFGHGRDIIDPMYV CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHH FAISGGVIAYLLGRSRRASFIAGTLGYLTYNLIILGQVLTGRVVSQVMIGGAGAFDSIII HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SGLLAVLLAELVGETRERIQGGPVRGNNLPGKERRSDDDEK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SIGALLLIVLGVLIYFGAAQRVLDKLYLTDIMALVVIAGIIIGSFVDFTVLRNPVVTIN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE LGGAIIPVILAIYVLSRAGTYRELVRTIIAVVLTGGAIYGLSQFFKNFGHGRDIIDPMYV CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHH FAISGGVIAYLLGRSRRASFIAGTLGYLTYNLIILGQVLTGRVVSQVMIGGAGAFDSIII HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SGLLAVLLAELVGETRERIQGGPVRGNNLPGKERRSDDDEK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA