Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
---|---|
Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is mjaIIIM [H]
Identifier: 220931288
GI number: 220931288
Start: 475626
End: 476546
Strand: Reverse
Name: mjaIIIM [H]
Synonym: Hore_04430
Alternate gene names: 220931288
Gene position: 476546-475626 (Counterclockwise)
Preceding gene: 220931293
Following gene: 220931260
Centisome position: 18.48
GC content: 29.32
Gene sequence:
>921_bases ATGAACTTACCATGTGAGGCAAATACAACCCGGAAAACAACAAAATATGCAAAGCCATTTGTAAAATGGGCCGGAGGAAA AAGACAACTTATTCCTGATTTATTTAATTCATTACCTGATAATATTGAAAGATACTTTGAGCCCTTTGTAGGTGCCGGAG CTCTTTTTTTTGAATTAGCAAATAACAATGTAATATCCGGAAGAAAAAGTATTATAGTAGACCTTAATGATGATCTGATA AATGCATATAAAGTTATAAAAAATTCTGTTGAATCTCTTATTAATGAATTAAAAAAACATGAAAAAAATAATAATGAAAT ATATTATTATAAAGTTAGAGGACTATGGACGCGAAAGGCCAGAGAGTTAGGTCTATCCAGGAAAGAACTATGGAGTGTAA ATGAGCTTAACAATATCCAGAAAGCAGCCAGATTTATATATCTTAATAAAACCTGCTACAATGGTTTATACCGTTTGAAT AATAAAGGTCAATTTAATGTACCTTATGGTAATTATAAAAATCCCAGGATATGTGATGAAGATAATCTAAGGACTGTTAG CCAATTATTACAAAACGTTACAATAATTAAAAACGATTTTGAAATAATAAAAGATAAGTATAGATTTACACCGGCCGATT TTGTTTACTTTGATCCTCCCTATGTACCCTTGTCAGATACTTCTAATTTTACTTCTTATACAAAAAATGGGTTTACTAAA GAAGATCAGGAAAGGTTATACGAATTATTCAATTATATCGATATGCAGGGTGGGAAATGCATGTTAAGCAATTCAAACTC TCCATTGATAAAAAAACTATATTCAAAATTCAATATTAAAGAAGTTAAAGCAATTAGAGCTATAAATTGTATTGGAAACA AACGGGGAGCAATAAAAGAATTAATAATAACTAACTATTAA
Upstream 100 bases:
>100_bases ATTGTTCTGATTTTTTGAGTAAGTTTTGAAGGATATTATAATATTATATTGAATATAACTTATAAGGTTATTTTGGATGA TACTCAGGAGGTATATAATA
Downstream 100 bases:
>100_bases TTAAAGCAAGGGTATATGCCCTTGCTTTTTTAAATTTTTATGATTTTATTTTTTTCTGTGTAAGGTTAATAATCCATTCA AGCCATTTTCTAACTGTTTG
Product: DNA adenine methylase
Products: NA
Alternate protein names: M.MjaIII; Adenine-specific methyltransferase MjaIII [H]
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MNLPCEANTTRKTTKYAKPFVKWAGGKRQLIPDLFNSLPDNIERYFEPFVGAGALFFELANNNVISGRKSIIVDLNDDLI NAYKVIKNSVESLINELKKHEKNNNEIYYYKVRGLWTRKARELGLSRKELWSVNELNNIQKAARFIYLNKTCYNGLYRLN NKGQFNVPYGNYKNPRICDEDNLRTVSQLLQNVTIIKNDFEIIKDKYRFTPADFVYFDPPYVPLSDTSNFTSYTKNGFTK EDQERLYELFNYIDMQGGKCMLSNSNSPLIKKLYSKFNIKEVKAIRAINCIGNKRGAIKELIITNY
Sequences:
>Translated_306_residues MNLPCEANTTRKTTKYAKPFVKWAGGKRQLIPDLFNSLPDNIERYFEPFVGAGALFFELANNNVISGRKSIIVDLNDDLI NAYKVIKNSVESLINELKKHEKNNNEIYYYKVRGLWTRKARELGLSRKELWSVNELNNIQKAARFIYLNKTCYNGLYRLN NKGQFNVPYGNYKNPRICDEDNLRTVSQLLQNVTIIKNDFEIIKDKYRFTPADFVYFDPPYVPLSDTSNFTSYTKNGFTK EDQERLYELFNYIDMQGGKCMLSNSNSPLIKKLYSKFNIKEVKAIRAINCIGNKRGAIKELIITNY >Mature_306_residues MNLPCEANTTRKTTKYAKPFVKWAGGKRQLIPDLFNSLPDNIERYFEPFVGAGALFFELANNNVISGRKSIIVDLNDDLI NAYKVIKNSVESLINELKKHEKNNNEIYYYKVRGLWTRKARELGLSRKELWSVNELNNIQKAARFIYLNKTCYNGLYRLN NKGQFNVPYGNYKNPRICDEDNLRTVSQLLQNVTIIKNDFEIIKDKYRFTPADFVYFDPPYVPLSDTSNFTSYTKNGFTK EDQERLYELFNYIDMQGGKCMLSNSNSPLIKKLYSKFNIKEVKAIRAINCIGNKRGAIKELIITNY
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the MjaIII endonuclease (Potential) [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789789, Length=292, Percent_Identity=34.5890410958904, Blast_Score=141, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 35614; Mature: 35614
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPCEANTTRKTTKYAKPFVKWAGGKRQLIPDLFNSLPDNIERYFEPFVGAGALFFELA CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEC NNNVISGRKSIIVDLNDDLINAYKVIKNSVESLINELKKHEKNNNEIYYYKVRGLWTRKA CCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH RELGLSRKELWSVNELNNIQKAARFIYLNKTCYNGLYRLNNKGQFNVPYGNYKNPRICDE HHHCCCHHHHHCHHHHHHHHHHHHHEEECHHHHCCCEEECCCCEEECCCCCCCCCCCCCC DNLRTVSQLLQNVTIIKNDFEIIKDKYRFTPADFVYFDPPYVPLSDTSNFTSYTKNGFTK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCC EDQERLYELFNYIDMQGGKCMLSNSNSPLIKKLYSKFNIKEVKAIRAINCIGNKRGAIKE HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHH LIITNY HHHCCC >Mature Secondary Structure MNLPCEANTTRKTTKYAKPFVKWAGGKRQLIPDLFNSLPDNIERYFEPFVGAGALFFELA CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEC NNNVISGRKSIIVDLNDDLINAYKVIKNSVESLINELKKHEKNNNEIYYYKVRGLWTRKA CCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH RELGLSRKELWSVNELNNIQKAARFIYLNKTCYNGLYRLNNKGQFNVPYGNYKNPRICDE HHHCCCHHHHHCHHHHHHHHHHHHHEEECHHHHCCCEEECCCCEEECCCCCCCCCCCCCC DNLRTVSQLLQNVTIIKNDFEIIKDKYRFTPADFVYFDPPYVPLSDTSNFTSYTKNGFTK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCC EDQERLYELFNYIDMQGGKCMLSNSNSPLIKKLYSKFNIKEVKAIRAINCIGNKRGAIKE HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHH LIITNY HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]