Click here to switch to the map view.

The map label for this gene is yhfA [H]

Identifier: 220931122

GI number: 220931122

Start: 277701

End: 278093

Strand: Direct

Name: yhfA [H]

Synonym: Hore_02740

Alternate gene names: 220931122

Gene position: 277701-278093 (Clockwise)

Preceding gene: 220931121

Following gene: 220931123

Centisome position: 10.77

GC content: 34.86

Gene sequence:

>393_bases
ATGAAGACAAAAGTTGTCTGGCAGGGAGGACTTAAGTTTATTGATAAGTTTGATGACGGTCAGGAAATTTTAATGGGTTC
TTCGGAGAACAGTGAAGGGGTTAGCCCTTTAAAATTATTACTTACTGGAGTAGCCGGATGTACCGGTATTGATATAATTA
TGATTCTTGAAAAGATGCGTTTGAATGTTGAAAAGTTTAGTATAGTAGTTGAAGGGGTAAGGGCAGATGAACATCCCCGG
CGCTTTATCGAAATTGATATTAAGTACATTCTTAAAGGAGATAATTTATCTGAGGACAAAGTGGAACGGGCTATTGAACT
CTCAATAGATAAATACTGTTCAGCGAGTAATTCCTTAAATTCAAAAATTAATTATTCTTATGTTATCGAATAA

Upstream 100 bases:

>100_bases
GGTTTACTATGGTGTATTGTTGTTCATTTTGCTGCAGATATAATTGGGTTTACGGTTGGCTATTTTAAGGTTATGTAAAA
ATACTAGTGGGGGGTAAAGA

Downstream 100 bases:

>100_bases
AATACTGCAGGTGTAAGCCTGCAGTATTTATAAAATTGGGTGTTTTTTTGTTATATTTAATTTATAAAAGTAATACCTTC
AGGTCAGGGTTCAGACGGAA

Product: OsmC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKTKVVWQGGLKFIDKFDDGQEILMGSSENSEGVSPLKLLLTGVAGCTGIDIIMILEKMRLNVEKFSIVVEGVRADEHPR
RFIEIDIKYILKGDNLSEDKVERAIELSIDKYCSASNSLNSKINYSYVIE

Sequences:

>Translated_130_residues
MKTKVVWQGGLKFIDKFDDGQEILMGSSENSEGVSPLKLLLTGVAGCTGIDIIMILEKMRLNVEKFSIVVEGVRADEHPR
RFIEIDIKYILKGDNLSEDKVERAIELSIDKYCSASNSLNSKINYSYVIE
>Mature_130_residues
MKTKVVWQGGLKFIDKFDDGQEILMGSSENSEGVSPLKLLLTGVAGCTGIDIIMILEKMRLNVEKFSIVVEGVRADEHPR
RFIEIDIKYILKGDNLSEDKVERAIELSIDKYCSASNSLNSKINYSYVIE

Specific function: Unknown

COG id: COG1765

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789755, Length=130, Percent_Identity=33.0769230769231, Blast_Score=94, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 14603; Mature: 14603

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKVVWQGGLKFIDKFDDGQEILMGSSENSEGVSPLKLLLTGVAGCTGIDIIMILEKMR
CCCEEEECCCHHEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
LNVEKFSIVVEGVRADEHPRRFIEIDIKYILKGDNLSEDKVERAIELSIDKYCSASNSLN
CCHHHHEEEEECCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
SKINYSYVIE
CCCCEEEEEC
>Mature Secondary Structure
MKTKVVWQGGLKFIDKFDDGQEILMGSSENSEGVSPLKLLLTGVAGCTGIDIIMILEKMR
CCCEEEECCCHHEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
LNVEKFSIVVEGVRADEHPRRFIEIDIKYILKGDNLSEDKVERAIELSIDKYCSASNSLN
CCHHHHEEEEECCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
SKINYSYVIE
CCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]