Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220931121

Identifier: 220931121

GI number: 220931121

Start: 276974

End: 277678

Strand: Direct

Name: 220931121

Synonym: Hore_02730

Alternate gene names: NA

Gene position: 276974-277678 (Clockwise)

Preceding gene: 220931117

Following gene: 220931122

Centisome position: 10.74

GC content: 29.79

Gene sequence:

>705_bases
ATGAAACTGGTTAGCTCGAAAAGGGAACTAGTAGTTTTAATTTGCTTAGTTATTCTTTTAATAATATCAAATATAATAAT
AACCAGAGGAGTCTTGATGACAGATAATATTCCTGGGACAGATGTATTTAATATATATAGGGCCAGAATCATTGATACCC
TGCTTCACCTTGTTTTTCTAGTATTCGGGGTATTATTATATAAACACTCCCACCAAAATAATTATTTTTCAAATGGATTT
GAGGAAATAACTTTAAAAAACATTACATCATTTATTATCAGCCTTTTGATAATTTTGTTCACTAACATCCAGTGGTTTTT
TGTTAATGAGGCGCAATTAGAAATGCTGACATCTTCCAGTAAGTATAATTTATTATTTAAAAATTACTATAATATTCTGG
GGTATTCCCTACGGGCGGGGGTTGGTGAAGAAATTATCTTCAGGCTTTTTTTAATTTCCCTTTTTGTTTTTATCATTAAA
AAAATAAATGTAAAAATTGATGCAGTTAAGGTTAGTGTAGTAATTGCTTCATTGTTATTTATATTTATTCATCCACTGGG
TAATTTTCTGTTTGCTTTTTTAGTGTTTATGGTAGGTCTGGGATTTGGCTACTTATTTGTCAATAATGGTTTACTATGGT
GTATTGTTGTTCATTTTGCTGCAGATATAATTGGGTTTACGGTTGGCTATTTTAAGGTTATGTAA

Upstream 100 bases:

>100_bases
AGGTCAGAAGATAGAAAATTATATAATTAAAGGGACTTATTACTTTTTTAAAAAGGTAAGAAAAAGCAGGATTTATATTT
TAAGAAAGGGAGCTGGGAAT

Downstream 100 bases:

>100_bases
AAATACTAGTGGGGGGTAAAGAATGAAGACAAAAGTTGTCTGGCAGGGAGGACTTAAGTTTATTGATAAGTTTGATGACG
GTCAGGAAATTTTAATGGGT

Product: abortive infection protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKLVSSKRELVVLICLVILLIISNIIITRGVLMTDNIPGTDVFNIYRARIIDTLLHLVFLVFGVLLYKHSHQNNYFSNGF
EEITLKNITSFIISLLIILFTNIQWFFVNEAQLEMLTSSSKYNLLFKNYYNILGYSLRAGVGEEIIFRLFLISLFVFIIK
KINVKIDAVKVSVVIASLLFIFIHPLGNFLFAFLVFMVGLGFGYLFVNNGLLWCIVVHFAADIIGFTVGYFKVM

Sequences:

>Translated_234_residues
MKLVSSKRELVVLICLVILLIISNIIITRGVLMTDNIPGTDVFNIYRARIIDTLLHLVFLVFGVLLYKHSHQNNYFSNGF
EEITLKNITSFIISLLIILFTNIQWFFVNEAQLEMLTSSSKYNLLFKNYYNILGYSLRAGVGEEIIFRLFLISLFVFIIK
KINVKIDAVKVSVVIASLLFIFIHPLGNFLFAFLVFMVGLGFGYLFVNNGLLWCIVVHFAADIIGFTVGYFKVM
>Mature_234_residues
MKLVSSKRELVVLICLVILLIISNIIITRGVLMTDNIPGTDVFNIYRARIIDTLLHLVFLVFGVLLYKHSHQNNYFSNGF
EEITLKNITSFIISLLIILFTNIQWFFVNEAQLEMLTSSSKYNLLFKNYYNILGYSLRAGVGEEIIFRLFLISLFVFIIK
KINVKIDAVKVSVVIASLLFIFIHPLGNFLFAFLVFMVGLGFGYLFVNNGLLWCIVVHFAADIIGFTVGYFKVM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26775; Mature: 26775

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVSSKRELVVLICLVILLIISNIIITRGVLMTDNIPGTDVFNIYRARIIDTLLHLVFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VFGVLLYKHSHQNNYFSNGFEEITLKNITSFIISLLIILFTNIQWFFVNEAQLEMLTSSS
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCC
KYNLLFKNYYNILGYSLRAGVGEEIIFRLFLISLFVFIIKKINVKIDAVKVSVVIASLLF
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHH
IFIHPLGNFLFAFLVFMVGLGFGYLFVNNGLLWCIVVHFAADIIGFTVGYFKVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLVSSKRELVVLICLVILLIISNIIITRGVLMTDNIPGTDVFNIYRARIIDTLLHLVFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VFGVLLYKHSHQNNYFSNGFEEITLKNITSFIISLLIILFTNIQWFFVNEAQLEMLTSSS
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCC
KYNLLFKNYYNILGYSLRAGVGEEIIFRLFLISLFVFIIKKINVKIDAVKVSVVIASLLF
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHH
IFIHPLGNFLFAFLVFMVGLGFGYLFVNNGLLWCIVVHFAADIIGFTVGYFKVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA