Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220931121
Identifier: 220931121
GI number: 220931121
Start: 276974
End: 277678
Strand: Direct
Name: 220931121
Synonym: Hore_02730
Alternate gene names: NA
Gene position: 276974-277678 (Clockwise)
Preceding gene: 220931117
Following gene: 220931122
Centisome position: 10.74
GC content: 29.79
Gene sequence:
>705_bases ATGAAACTGGTTAGCTCGAAAAGGGAACTAGTAGTTTTAATTTGCTTAGTTATTCTTTTAATAATATCAAATATAATAAT AACCAGAGGAGTCTTGATGACAGATAATATTCCTGGGACAGATGTATTTAATATATATAGGGCCAGAATCATTGATACCC TGCTTCACCTTGTTTTTCTAGTATTCGGGGTATTATTATATAAACACTCCCACCAAAATAATTATTTTTCAAATGGATTT GAGGAAATAACTTTAAAAAACATTACATCATTTATTATCAGCCTTTTGATAATTTTGTTCACTAACATCCAGTGGTTTTT TGTTAATGAGGCGCAATTAGAAATGCTGACATCTTCCAGTAAGTATAATTTATTATTTAAAAATTACTATAATATTCTGG GGTATTCCCTACGGGCGGGGGTTGGTGAAGAAATTATCTTCAGGCTTTTTTTAATTTCCCTTTTTGTTTTTATCATTAAA AAAATAAATGTAAAAATTGATGCAGTTAAGGTTAGTGTAGTAATTGCTTCATTGTTATTTATATTTATTCATCCACTGGG TAATTTTCTGTTTGCTTTTTTAGTGTTTATGGTAGGTCTGGGATTTGGCTACTTATTTGTCAATAATGGTTTACTATGGT GTATTGTTGTTCATTTTGCTGCAGATATAATTGGGTTTACGGTTGGCTATTTTAAGGTTATGTAA
Upstream 100 bases:
>100_bases AGGTCAGAAGATAGAAAATTATATAATTAAAGGGACTTATTACTTTTTTAAAAAGGTAAGAAAAAGCAGGATTTATATTT TAAGAAAGGGAGCTGGGAAT
Downstream 100 bases:
>100_bases AAATACTAGTGGGGGGTAAAGAATGAAGACAAAAGTTGTCTGGCAGGGAGGACTTAAGTTTATTGATAAGTTTGATGACG GTCAGGAAATTTTAATGGGT
Product: abortive infection protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MKLVSSKRELVVLICLVILLIISNIIITRGVLMTDNIPGTDVFNIYRARIIDTLLHLVFLVFGVLLYKHSHQNNYFSNGF EEITLKNITSFIISLLIILFTNIQWFFVNEAQLEMLTSSSKYNLLFKNYYNILGYSLRAGVGEEIIFRLFLISLFVFIIK KINVKIDAVKVSVVIASLLFIFIHPLGNFLFAFLVFMVGLGFGYLFVNNGLLWCIVVHFAADIIGFTVGYFKVM
Sequences:
>Translated_234_residues MKLVSSKRELVVLICLVILLIISNIIITRGVLMTDNIPGTDVFNIYRARIIDTLLHLVFLVFGVLLYKHSHQNNYFSNGF EEITLKNITSFIISLLIILFTNIQWFFVNEAQLEMLTSSSKYNLLFKNYYNILGYSLRAGVGEEIIFRLFLISLFVFIIK KINVKIDAVKVSVVIASLLFIFIHPLGNFLFAFLVFMVGLGFGYLFVNNGLLWCIVVHFAADIIGFTVGYFKVM >Mature_234_residues MKLVSSKRELVVLICLVILLIISNIIITRGVLMTDNIPGTDVFNIYRARIIDTLLHLVFLVFGVLLYKHSHQNNYFSNGF EEITLKNITSFIISLLIILFTNIQWFFVNEAQLEMLTSSSKYNLLFKNYYNILGYSLRAGVGEEIIFRLFLISLFVFIIK KINVKIDAVKVSVVIASLLFIFIHPLGNFLFAFLVFMVGLGFGYLFVNNGLLWCIVVHFAADIIGFTVGYFKVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26775; Mature: 26775
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVSSKRELVVLICLVILLIISNIIITRGVLMTDNIPGTDVFNIYRARIIDTLLHLVFL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH VFGVLLYKHSHQNNYFSNGFEEITLKNITSFIISLLIILFTNIQWFFVNEAQLEMLTSSS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCC KYNLLFKNYYNILGYSLRAGVGEEIIFRLFLISLFVFIIKKINVKIDAVKVSVVIASLLF CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHH IFIHPLGNFLFAFLVFMVGLGFGYLFVNNGLLWCIVVHFAADIIGFTVGYFKVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLVSSKRELVVLICLVILLIISNIIITRGVLMTDNIPGTDVFNIYRARIIDTLLHLVFL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH VFGVLLYKHSHQNNYFSNGFEEITLKNITSFIISLLIILFTNIQWFFVNEAQLEMLTSSS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCC KYNLLFKNYYNILGYSLRAGVGEEIIFRLFLISLFVFIIKKINVKIDAVKVSVVIASLLF CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHH IFIHPLGNFLFAFLVFMVGLGFGYLFVNNGLLWCIVVHFAADIIGFTVGYFKVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA